Information on SUBCLASS 6.39.1 |
Subclass Accession number: 8683
Subclass: 6.39.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 4.2 +/- 0.0 Average RMSD (Å) : 1.500 +/- 0.000 Consensus geometry
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Consensus Sequence: | XhchphLhpX |
(φψ)-conformation: | aalpabppbb |
Pattern: | [ER] | [KT] | [AQ] | x | [DE] | [AE] | [MY] | [GR] | [NW] | [FV] | [GV] | [DK] | [HI] | [WY] | [GN] | [AF] | [KR] | [CG] | [L] | [AL] | [DY] | [IT] | [EK] | [GV] |
Conservation: | 0.211 | -0.249 | -0.480 | -1.401 | 1.362 | -0.480 | 0.211 | -0.480 | -0.019 | -0.249 | -1.170 | -0.019 | -0.710 | 2.974 | 0.672 | -0.710 | 1.132 | -0.019 | 1.593 | -0.710 | -0.480 | -0.480 | 0.672 | -1.170 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c0a_A_331 | 1c0a | A | 331 | 354 | RKQIDEYGNFVKIYGAKGLAYIKV | HHHHHHHHHHHHHTT-S---EEEE | aaaaaaaaaaaaaagxabbxbbxb |
1t7p_A_663 | 1t7p | A | 671 | 694 | ETAQEAMRWVGDHWNFRCLLDTEG | HHHHHHHHHHHHHTT-SS---EEE | aaaaaaaaaaaaaalxabxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | A - 346 |
1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | K - 347 |
1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | G - 348 |
1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | L - 349 |
1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | A - 350 |
1c0a_A_331 | 1c0a | A | AMPADENOSINE MONOPHOSPHATE | Y - 351 |
1t7p_A_663 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | E - 693 |
Clusters included in this Subclass |
CLUSTER: HE.7.155 |