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Information on SUBCLASS 6.39.1
Subclass Accession number: 8683
Subclass: 6.39.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 4.2 +/- 0.0
Average RMSD (Å) : 1.500 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XhchphLhpX
(φψ)-conformation: aalpabppbb
Pattern: [ER][KT][AQ]x[DE][AE][MY][GR][NW][FV][GV][DK][HI][WY][GN][AF][KR][CG][L][AL][DY][IT][EK][GV]
Conservation:0.211-0.249-0.480-1.4011.362-0.4800.211-0.480-0.019-0.249-1.170-0.019-0.7102.9740.672-0.7101.132-0.0191.593-0.710-0.480-0.4800.672-1.170
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c0a_A_3311c0a   A331354RKQIDEYGNFVKIYGAKGLAYIKVHHHHHHHHHHHHHTT-S---EEEEaaaaaaaaaaaaaagxabbxbbxb
1t7p_A_6631t7p   A671694ETAQEAMRWVGDHWNFRCLLDTEGHHHHHHHHHHHHHTT-SS---EEEaaaaaaaaaaaaaalxabxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c0a_A_3311c0a   A     AMPADENOSINE MONOPHOSPHATE A - 346
1c0a_A_3311c0a   A     AMPADENOSINE MONOPHOSPHATE K - 347
1c0a_A_3311c0a   A     AMPADENOSINE MONOPHOSPHATE G - 348
1c0a_A_3311c0a   A     AMPADENOSINE MONOPHOSPHATE L - 349
1c0a_A_3311c0a   A     AMPADENOSINE MONOPHOSPHATE A - 350
1c0a_A_3311c0a   A     AMPADENOSINE MONOPHOSPHATE Y - 351
1t7p_A_6631t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE E - 693

Clusters included in this Subclass
CLUSTER: HE.7.155