ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.16.1

Subclass Accession number: 9022
Subclass: 3.16.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 15.4 +/- 0.0
Average RMSD (Å) : 0.800 +/- 0.000

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	LXphcAc
(φψ)-conformation:	aappbaa

Pattern:	[A]	[L]	[DT]	[KS]	[AI]	x	[RT]	[ET]	[L]	[FK]	[DY]	[AY]	[GN]	[A]	[DN]	[RS]	[AI]	[AW]	[SY]	[AI]	[AL]	x	[AV]	[FL]	x	[AQ]
Conservation:	1.847	1.847	0.078	0.078	-0.680	-1.438	-0.175	-0.175	1.847	-0.933	-0.428	-0.428	0.836	1.847	1.341	-0.428	-0.680	0.078	-0.428	-0.680	-0.680	-0.933	-0.175	0.330	-1.438	-0.428

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c30_A_420	1c30	A	420	445	ALTKIRRELKDAGADRIWYIADAFRA	HHHHHHHHHHS-BTTHHHHHHHHHHH	aaaaaaaaaabpbaaaaaaaaaaaaa
1mrj_*_129	1mrj	-	131	156	ALDSAITTLFYYNANSAASALMVLIQ	HHHHHHHHHHTT-HHHHHHHHHHHHH	aaaaaaaaaaxpbaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mrj_*_129	1mrj	*	ADNADENOSINE	I - 155

Clusters included in this Subclass