Information on SUBCLASS 5.1.4 |
Subclass Accession number: 1362
Subclass: 5.1.4 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.2 +/- 13.5 Average RMSD (Å) : 0.920 +/- 0.415 Consensus geometry
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Consensus Sequence: | XhpXphPXp |
(φψ)-conformation: | pbpaappaa |
Pattern: | x | [ipt] | [aily] | [dnp] | x | x | [IMVY] | [NP] | x | [AER] | [ENR] | x |
Conservation: | -0.363 | -0.519 | -0.707 | -0.298 | -0.882 | -0.233 | 0.460 | 2.555 | -1.128 | 0.338 | 1.002 | -0.224 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amu_A_115 | 1amu | A | 117 | 128 | VPIDIEYPKERI | EE--TTS-HHHH | bwbxaaxxaaaa |
1b16_A_56 | 1b16 | A | 60 | 71 | HTYDVTVPVAES | EE--TTS-HHHH | bxbbaaxxaaaa |
1i19_A_275 | 1i19 | A | 278 | 289 | CQSYTDIPWREL | EEEE--S-HHHH | bbbbaabpaaaa |
1jqb_A_1134 | 1jqb | A | 1134 | 1145 | AILPKDMPLENA | EE--TTS-HHHH | bxxpaaxpaaaa |
1lci_*_101 | 1lci | - | 103 | 114 | APANDIYNEREL | EE--TT--HHHH | bwbpaapxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | Y - 62 |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | D - 63 |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | V - 64 |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | T - 65 |
Clusters included in this Subclass |
CLUSTER: EH.5.88 |