Information on SUBCLASS 2.1.3 |
Subclass Accession number: 4503
Subclass: 2.1.3 ![]() Type: HH alpha-alpha DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 28 Average sequence ID (%) : 11.1 +/- 13.6 Average RMSD (Å) : 0.639 +/- 0.217 Consensus geometry
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Consensus Sequence: | XphpXX |
(φψ)-conformation: | aappaa |
Pattern: | x | x | x | x | x | [dehknrstw] | [aiklmtv] | [deknpqst] | x | [adegkqrst] | [dehkqrt] | x |
Conservation: | -1.328 | -1.305 | -0.314 | -0.291 | -0.733 | 0.243 | 1.357 | 1.603 | -0.947 | 0.424 | 1.110 | 0.180 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a41_*_288 | 1a41 | - | 289 | 300 | LDVVSKTTFDEF | HHHHTT--HHHH | aaaaaaxxaaaa |
1a4s_A_57 | 1a4s | A | 71 | 82 | YLKWSKMAGIER | HHHHTTS-HHHH | aaaaaaxxaaaa |
1aa7_A_109 | 1aa7 | A | 113 | 124 | KEISLSYSAGAL | HHHHTTS-HHHH | aaaaaabxaaaa |
1b3u_A_101 | 1b3u | A | 112 | 123 | RAISHEHSPSDL | HHHHTTS-HHHH | aaaaaaxxaaaa |
1cb6_A_1316 | 1cb6 | A | 1327 | 1338 | AIQNLRKSEEEV | HHHHTTS-HHHH | aaaaaaxxaaaa |
1dmt_A_348 | 1dmt | A | 355 | 366 | KPILTKYSARDL | HHHHTTS-HHHH | aaaaaabxaaaa |
1eex_A_98 | 1eex | A | 102 | 113 | VPLTTAMTPAKI | HHHHTTS-HHHH | aaaaaaxxaaaa |
1eex_G_99 | 1eex | G | 108 | 119 | AAELTAVPDDRI | HHHHTTS-HHHH | aaaaaaxxaaaa |
1fwx_A_61 | 1fwx | A | 65 | 76 | RIHERTMSERTK | HHHHTT--HHHH | aaaaaapxaaaa |
1g71_A_202 | 1g71 | A | 211 | 222 | GYFILRVNVPHL | HHHHTT--HHHH | aaaaaapbaaaa |
1i2t_A_1029 | 1i2t | A | 1033 | 1044 | TGMLLELSPAQL | HHHHTTS-HHHH | aaaaaaxxaaaa |
1iex_A_12 | 1iex | A | 17 | 28 | ADLLGRMTLAEK | HHHHTT--HHHH | aaaaaaxxaaaa |
1j1n_A_393 | 1j1n | A | 394 | 405 | DYERQWTTPEAQ | HHHHTT--HHHH | aaaaaaxxaaaa |
1jm6_A_1038 | 1jm6 | A | 1057 | 1068 | MKEINLLPDRVL | HHHHTTS-HHHH | aaaaaaxpaaaa |
1m4z_A_189 | 1m4z | A | 193 | 204 | KAYIKKVEPREA | HHHHTTS-HHHH | aaaaaaxxaaaa |
1nlf_A_80 | 1nlf | A | 88 | 99 | HALGAHLSAEER | HHHHTTS-HHHH | aaaaaabxaaaa |
1o20_A_3 | 1o20 | A | 15 | 26 | WDVLRNATTREK | HHHHTT--HHHH | aaaaaaxxaaaa |
1p1m_A_80 | 1p1m | A | 81 | 92 | LPIEDRLTEKMA | HHHHTT--HHHH | aaaaaaxxaaaa |
1pmq_A_284 | 1pmq | A | 284 | 295 | PEFMKKLQPTVR | HHHHHTS-HHHH | aaaaaaxpaaaa |
1q0s_A_53 | 1q0s | A | 59 | 70 | YKRLINVSWDDV | HHHHTT--HHHH | aaaaaabbaaaa |
1qb2_A_365 | 1qb2 | A | 376 | 387 | MTIMDSMNDQEL | HHHHTTS-HHHH | aaaaaaxxaaaa |
1qc7_A_246 | 1qc7 | A | 250 | 261 | QLVLREVDTRDL | HHHHTSS-HHHH | aaaaaabxaaaa |
1qgr_A_573 | 1qgr | A | 589 | 600 | QNVLRKVQHQDA | HHHHTTS-HHHH | aaaaaaxxaaaa |
1qr0_A_14 | 1qr0 | A | 18 | 29 | ERFMTFISPEKR | HHHHTTS-HHHH | aaaaaaxxaaaa |
1rp3_A_164 | 1rp3 | A | 179 | 190 | KEAVSKLPEREK | HHHHTTS-HHHH | aaaaaabxaaaa |
1utg_*_32 | 1utg | - | 42 | 53 | KKVLDSLPQTTR | HHHHTTS-HHHH | aaaaaaxwaaaa |
1uzb_A_73 | 1uzb | A | 87 | 98 | FKTWKDWPQEDR | HHHHTTS-HHHH | aaaaaaxxaaaa |
1v33_A_202 | 1v33 | A | 211 | 222 | GYFILRIKLPHL | HHHHTT--HHHH | aaaaaaxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j1n_A_393 | 1j1n | A | MAW4-DEOXY-D-MANNURONIC ACID | Y - 395 |
1j1n_A_393 | 1j1n | A | MAVD-MANNURONIC ACID | Y - 395 |
1j1n_A_393 | 1j1n | A | MAW4-DEOXY-D-MANNURONIC ACID | E - 396 |
1j1n_A_393 | 1j1n | A | MAW4-DEOXY-D-MANNURONIC ACID | W - 399 |
1o20_A_3 | 1o20 | A | MSESELENOMETHIONINE | L - 4 |
1o20_A_3 | 1o20 | A | MSESELENOMETHIONINE | A - 34 |
1o20_A_3 | 1o20 | A | MSESELENOMETHIONINE | L - 37 |
1p1m_A_80 | 1p1m | A | METMETHIONINE | L - 81 |
1p1m_A_80 | 1p1m | A | METMETHIONINE | E - 84 |
1q0s_A_53 | 1q0s | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 55 |
1qr0_A_14 | 1qr0 | A | COACOENZYME A | K - 28 |
1qr0_A_14 | 1qr0 | A | COACOENZYME A | K - 31 |
1uzb_A_73 | 1uzb | A | MRD(4R)-2-METHYLPENTANE-2,4-DIOL | K - 91 |
1uzb_A_73 | 1uzb | A | MRD(4R)-2-METHYLPENTANE-2,4-DIOL | D - 92 |
Clusters included in this Subclass |
CLUSTER: HH.3.28 |
CLUSTER: HH.4.64 |