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Information on SUBCLASS 2.3.3
Subclass Accession number: 5365
Subclass: 2.3.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 18.2 +/- 17.7
Average RMSD (Å) : 0.706 +/- 0.241

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXXDXh
(φψ)-conformation: aababb
Pattern: [AILMVY][adegknrs]x[AILV][adegkqrs][eknpqrt]xx[DEKS]x[AILTV]x
Conservation:0.716-0.419-0.5900.570-0.799-0.032-0.799-0.8782.270-0.8871.228-0.380
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4i_A_2581a4i   A258268YDEAKERASFI.HHHHTTT-SEE.aaaaaaaxabb.
1duv_G_891duv   G93104ARVLGRMYDGIQHHHHTTT-SEEEaaaaaaababbb
1e4c_P_1341e4c   P140151VALALKNRKATLHHHHTSS-SEEEaaaaaaababbx
1e4e_A_1901e4e   A194205IESARQYDSKILHHHHTTT-SSEEaaaaaaababbb
1edq_A_3751edq   A375386YNVAQNSMDHIFHHHHGGG-SEEEaaaaaaababbx
1ekx_A_881ekx   A92103ISVISTYVDAIVHHHHTTT-SEEEaaaaaaababbx
1f9a_A_141f9a   A2031IKKIAEEVDEIIHHHHTTT-SEEEaaaaaaababbx
1iow_*_1631iow   -167178LRLAFQHDEEVLHHHHTTT-SEEEaaaaaaababbb
1iz5_A_101iz5   A1728IDTASKLIDEAAHHHHTSS-SEEEaaaaaaababbb
1iz5_A_1381iz5   A145156VKAASLVSDSIKHHHHTTT-SEEEaaaaaaababbx
1ml4_A_901ml4   A94105IKTVEQYCDVIVHHHHTTT-SEEEaaaaaaababbb
1o9p_A_3121o9p   A329340LGEVFEGVDVLLHHHHTTT-SEEEaaaaaaababbb
1plq_*_1411plq   -148159VRDLSQLSDSINHHHHHTT-SEEEaaaaaaababbx
1pvv_A_901pvv   A94105ARVLSRYVDAIMHHHHTTT-SEEEaaaaaaababbb
1qzo_A_1701qzo   A170181IAQISRHLDFISHHHHTTT-SEEEaaaaaaaxabbx
1rwz_A_1351rwz   A142153IAAADKISDQVIHHHHHTT-SEEEaaaaaaababbb
1v6s_A_1991v6s   A202213IESLLPRIDRLLHHHHGGG-SEEEaaaaaaababbb
1vj5_A_1341vj5   A140151MCELKMHFDFLIHHHHHTTSSEEEaaaaaaababbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1duv_G_891duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE R - 106
1e4c_P_1341e4c   P     ZNZINC ION L - 152
1e4e_A_1901e4e   A     GOLGLYCEROL E - 195
1e4e_A_1901e4e   A     GOLGLYCEROL S - 196
1e4e_A_1901e4e   A     GOLGLYCEROL R - 198
1e4e_A_1901e4e   A     GOLGLYCEROL Q - 199
1e4e_A_1901e4e   A     ADPADENOSINE-5'-DIPHOSPHATE E - 207
1e4e_A_1901e4e   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 208
1ekx_A_881ekx   A     PALN-(PHOSPHONACETYL)-L-ASPARTIC ACID R - 105
1f9a_A_141f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE K - 14
1f9a_A_141f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 15
1f9a_A_141f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE H - 16
1f9a_A_141f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 19
1iow_*_1631iow   *     ADPADENOSINE-5'-DIPHOSPHATE E - 180
1iow_*_1631iow   *     ADPADENOSINE-5'-DIPHOSPHATE K - 181
1ml4_A_901ml4   A     PALN-(PHOSPHONACETYL)-L-ASPARTIC ACID R - 107
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4e_A_1901e4e   A AC3ADP BINDING SITE FOR CHAIN AQ - 208

Clusters included in this Subclass
CLUSTER: HE.4.51
CLUSTER: HE.5.23
CLUSTER: HE.6.89