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PDB code:

Information on SUBCLASS 11.2.1

Subclass Accession number: 3565 Subclass: 11.2.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 7 Average sequence ID (%) : 48.3 +/- 25.3 Average RMSD (Å) : 0.257 +/- 0.053 Consensus geometry d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c1y_A_111	1c1y	A	111	137	MILVGNKCDLEDERVVGKEQGQNLARQ	EEEEEE-TT-GGG--S-HHHHHHHHHH	bbxbxxvaaaaaaxabxaaaaaaaaaa
1huq_A_128	1huq	A	129	155	IALAGNKADLASKRAVEFQEAQAYADD	EEEEEE-TT-GGG--S-HHHHHHHHHH	bbbbxxvaaaaaapabxaaaaaaaaaa
1kao_*_111	1kao	-	111	137	VILVGNKVDLESEREVSSSEGRALAEE	EEEEEE-GGGGGG--S-HHHHHHHHHH	bbbbxxvaaaaaapabxaaaaaaaaaa
1oiv_A_118	1oiv	A	119	145	IMLVGNKSDLRHLRAVPTDEARAFAEK	EEEEEE-TT-GGG--S-HHHHHHHHHH	bbxbxxvaaaaaapabxaaaaaaaaaa
1r2q_A_127	1r2q	A	128	154	IALSGNKADLANKRAVDFQEAQSYADD	EEEEEE-GGGGGG--S-HHHHHHHHHH	bbbbxxvaaaaaapabxaaaaaaaaaa
1uad_A_122	1uad	A	122	148	FLLVGNKSDLEDKRQVSVEEAKNRAEQ	EEEEEE-TT-GGG--S-HHHHHHHHHH	bbxbxxvaaaaaapabxaaaaaaaaaa
3rab_A_129	3rab	A	130	156	VLLVGNKCDMEDERVVSSERGRQLADH	EEEEEE-TT-GGG--S-HHHHHHHHHH	bbxbxxvaaaaaaxabxaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1c1y_A_111	1c1y	A	GTPGUANOSINE-5'-TRIPHOSPHATE	N - 116
1c1y_A_111	1c1y	A	GTPGUANOSINE-5'-TRIPHOSPHATE	K - 117
1c1y_A_111	1c1y	A	GTPGUANOSINE-5'-TRIPHOSPHATE	C - 118
1c1y_A_111	1c1y	A	GTPGUANOSINE-5'-TRIPHOSPHATE	D - 119
1c1y_A_111	1c1y	A	GTPGUANOSINE-5'-TRIPHOSPHATE	L - 120
1huq_A_128	1huq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	N - 134
1huq_A_128	1huq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	K - 135
1huq_A_128	1huq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	A - 136
1huq_A_128	1huq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 137
1huq_A_128	1huq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	L - 138
1kao_*_111	1kao	*	GDPGUANOSINE-5'-DIPHOSPHATE	N - 116
1kao_*_111	1kao	*	GDPGUANOSINE-5'-DIPHOSPHATE	K - 117
1kao_*_111	1kao	*	GDPGUANOSINE-5'-DIPHOSPHATE	V - 118
1kao_*_111	1kao	*	GDPGUANOSINE-5'-DIPHOSPHATE	D - 119
1kao_*_111	1kao	*	GDPGUANOSINE-5'-DIPHOSPHATE	L - 120
1oiv_A_118	1oiv	A	GDPGUANOSINE-5'-DIPHOSPHATE	N - 124
1oiv_A_118	1oiv	A	GDPGUANOSINE-5'-DIPHOSPHATE	K - 125
1oiv_A_118	1oiv	A	GDPGUANOSINE-5'-DIPHOSPHATE	S - 126
1oiv_A_118	1oiv	A	GDPGUANOSINE-5'-DIPHOSPHATE	D - 127
1oiv_A_118	1oiv	A	GDPGUANOSINE-5'-DIPHOSPHATE	L - 128
1r2q_A_127	1r2q	A	GOLGLYCEROL	V - 127
1r2q_A_127	1r2q	A	GOLGLYCEROL	I - 128
1r2q_A_127	1r2q	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	N - 133
1r2q_A_127	1r2q	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	K - 134
1r2q_A_127	1r2q	A	GOLGLYCEROL	K - 134
1r2q_A_127	1r2q	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	A - 135
1r2q_A_127	1r2q	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 136
1r2q_A_127	1r2q	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	L - 137
1r2q_A_127	1r2q	A	GOLGLYCEROL	L - 137
1r2q_A_127	1r2q	A	GOLGLYCEROL	K - 140
1r2q_A_127	1r2q	A	GOLGLYCEROL	R - 141
1r2q_A_127	1r2q	A	GOLGLYCEROL	A - 142
1uad_A_122	1uad	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	N - 127
1uad_A_122	1uad	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	K - 128
1uad_A_122	1uad	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	S - 129
1uad_A_122	1uad	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 130
1uad_A_122	1uad	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	L - 131
3rab_A_129	3rab	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	N - 135
3rab_A_129	3rab	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	K - 136
3rab_A_129	3rab	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	C - 137
3rab_A_129	3rab	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 138
3rab_A_129	3rab	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	M - 139

Clusters included in this Subclass

CLUSTER: EH.10.1

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