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Information on SUBCLASS 2.2.6
Subclass Accession number: 476
Subclass: 2.2.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4.21 (>75 %)  
GO : GO:0004252 (>75 %)  GO:0005509 (>75 %)  GO:0008236 (>75 %)  
SCOP : 50493 (>75 %)  50494 (>75 %)  50514 (>75 %)  
 Number of loops: 18

Average sequence ID (%) : 19.5 +/- 19.5
Average RMSD (Å) : 0.500 +/- 0.188

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXpXGX
(φψ)-conformation: bbaaeb
Pattern: xxx[adenps]x[GS][fgikltv]x[acfgilmvy]
Conservation:-0.559-0.326-0.3920.221-0.4932.598-0.461-0.284-0.303
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1as4_A_3271as4   A339347DVFEEGTEAEE-SSEEEEbbbaaebbb
1bkz_A_841bkz   A9199IASDDGFKAEE-SSEEEEbxbaaebxb
1dto_A_1511dto   A151159QVDYYGLYYEE-SSEEEEbbbaaebbb
1g0u_B_371g0u   B4048IMASDGIVLEE-SSEEEEbxxaaebbb
1g0u_F_371g0u   F4048IKCNDGVVFEE-SSEEEEbxbaaebbb
1h4r_A_2311h4r   A235243GVDALGLHIEE-SSEEEEbbbaaebbb
1hle_A_3271hle   A339347DLNEEGTEAEE-SSEEEEbbbaaebbb
1iz5_A_261iz5   A3038KVTEDGISMEE-SSEEEExbbaaebbb
1izn_B_1161izn   B122130WDLDHGFAGEE-SSEEEEbxbaaebbb
1j58_A_2361j58   A236244IESEGGKVYEE-SSEEEExxbaaebbb
1jti_A_3211jti   A333341EINEAGTEVEE-SSEEEEbbbaaebbb
1lj5_A_3171lj5   A327335EVNESGTVAEE-SSEEEEbbbaaebbb
1m2r_A_391m2r   A4654GRGKYSEVFEE-SSEEEEbbbaaebbb
1olt_A_4161olt   A417425DVDEKGIQVEE-SSEEEExbbaaebbx
1r0u_A_381r0u   A4553EEHDLGKVKEEETTEEEEbbbaaexbx
1r3c_A_241r3c   A3139GSGAYGSVCEE-SSEEEEebbaaebbb
1sfe_*_151sfe   -1927ADCELGRCLEEETTEEEEbxbaaexbb
1ubl_L_4691ubl   L475483VNAPRGGLSEEETTEEEEbxxaaexbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1as4_A_3271as4   A     ACTACETATE ION V - 337
1as4_A_3271as4   A     ACTACETATE ION L - 338
1as4_A_3271as4   A     ACTACETATE ION T - 345
1as4_A_3271as4   A     ACTACETATE ION E - 346
1as4_A_3271as4   A     ACTACETATE ION A - 347
1as4_A_3271as4   A     ACTACETATE ION R - 349
1j58_A_2361j58   A     MSESELENOMETHIONINE G - 240
1lj5_A_3171lj5   A     DMSDIMETHYL SULFOXIDE Q - 319
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE V - 45
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE G - 46
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE R - 47
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE V - 53
1r0u_A_381r0u   A     GOLGLYCEROL Y - 43
1r0u_A_381r0u   A     GOLGLYCEROL E - 45
1r0u_A_381r0u   A     GOLGLYCEROL T - 54
1r0u_A_381r0u   A     GOLGLYCEROL V - 56
1ubl_L_4691ubl   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) A - 477
1ubl_L_4691ubl   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) P - 478
1ubl_L_4691ubl   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) R - 479
1ubl_L_4691ubl   L     CMOCARBON MONOXIDE R - 479
1ubl_L_4691ubl   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) G - 480
1ubl_L_4691ubl   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) L - 482

Clusters included in this Subclass
CLUSTER: HA.3.32
CLUSTER: HA.4.31