Logo
Information on SUBCLASS 2.3.2
Subclass Accession number: 1093
Subclass: 2.3.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005524 (>75 %)  
 Number of loops: 18

Average sequence ID (%) : 10.3 +/- 13.2
Average RMSD (Å) : 0.650 +/- 0.176

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXXpXX
(φψ)-conformation: bbpbaa
Pattern: xxx[eknprst][adgnstv][denqsty][adegkqrst]xxx[aegknqr]x[afgikltv]xx
Conservation:0.491-1.0621.433-0.034-0.3851.212-0.180-1.238-1.3831.4301.299-0.112-0.251-1.2920.073
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxy_A_341bxy   A3549RVLEDTPAIRGNVEKEEEE--HHHHHHHHHbbbxxbaaaaaaaaa
1di6_A_401di6   A4559RLIPDEQAIIEQTLCEEEES-HHHHHHHHHbbbxxbaaaaaaaaa
1efv_A_1071efv   A108122ICAGASAFGKNLLPREEEESSHHHHHHHHHbbbxxbaaaaaaaaa
1ez0_A_2941ez0   A295309VFALNTPETQAFIETEEEESSHHHHHHHHHbbbxxbaaaaaaaaa
1ihp_*_1341ihp   -135149IRSSGSSRVIASGKKEEEES-HHHHHHHHHbbbxxbaaaaaaaaa
1ihu_A_1991ihu   A203217LVARLQKSTLQEVAREEEES-HHHHHHHHHxbbbxbaaaaaaaaa
1jet_A_3601jet   A363377LLYNTSDLHKKLAIAEEEES-HHHHHHHHHbxbxpbaaaaaaaaa
1kaf_A_1891kaf   A192206LDIKRSAENIEAVITEEEE--HHHHHHHHHbbbxxbaaaaaaaaa
1l6w_A_831l6w   A8498VKVPVTAEGLAAIKMEEEE-SHHHHHHHHHxxbxxbaaaaaaaaa
1mkz_A_431mkz   A4862AIVKENRYAIRAQVSEEE-S-HHHHHHHHHbbbxxbaaaaaaaaa
1nd6_A_701nd6   A7286IRSTDVDRTLMSAMTEEEES-HHHHHHHHHbbbxxbaaaaaaaaa
1oi2_A_1091oi2   A111125LIIKNYTGDILNFETEEEESSHHHHHHHHHbxbxxbaaaaaaaaa
1q7z_A_4091q7z   A411425NSAKVDEEELEMKINEEEES-HHHHHHHHHxMbxxbaaaaaaaaa
1qfx_A_1471qfx   A149163FFSSGYGRVIETARKEEEESBHHHHHHHHHbbbxxbaaaaaaaaa
1qo0_A_1421qo0   A145159FIGSDYIYPRESNHVEEEESSHHHHHHHHHbbbxxbaaaaaaaaa
1say_A_2151say   A215229ELLYSNSAEIETAVAEEEE--HHHHHHHHHxbbxxbaaaaaaaaa
1sei_A_231sei   A2438LEVPASKIKREIAEIEEEE--HHHHHHHHHbbbpxbaaaaaaaaa
1un8_A_1041un8   A106120LIVKNYTGDRLNFGLEEEES-HHHHHHHHHxbbxxbaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE R - 206
1ihu_A_1991ihu   A     TASTRIHYDROXYARSENITE(III) R - 206
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 208
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE K - 209
1ihu_A_1991ihu   A     ADPADENOSINE-5'-DIPHOSPHATE S - 210
1ihu_A_1991ihu   A     AF3ALUMINUM FLUORIDE S - 210
1ihu_A_1991ihu   A     AF3ALUMINUM FLUORIDE E - 214
1jet_A_3601jet   A     IUMURANYL (VI) ION T - 360
1jet_A_3601jet   A     IUMURANYL (VI) ION F - 361
1jet_A_3601jet   A     IUMURANYL (VI) ION D - 362
1jet_A_3601jet   A     IUMURANYL (VI) ION D - 369
1jet_A_3601jet   A     IUMURANYL (VI) ION K - 373
1l6w_A_831l6w   A     GOLGLYCEROL K - 85
1nd6_A_701nd6   A     PO4PHOSPHATE ION R - 79
1oi2_A_1091oi2   A     GOLGLYCEROL K - 114
1oi2_A_1091oi2   A     GOLGLYCEROL Y - 116
1oi2_A_1091oi2   A     GOLGLYCEROL T - 117
1oi2_A_1091oi2   A     GOLGLYCEROL G - 118
1oi2_A_1091oi2   A     GOLGLYCEROL D - 119
1qfx_A_1471qfx   A     NAGN-ACETYL-D-GLUCOSAMINE F - 150
1qfx_A_1471qfx   A     GOLGLYCEROL Y - 154
1qfx_A_1471qfx   A     GOLGLYCEROL R - 156
1qfx_A_1471qfx   A     GOLGLYCEROL E - 159
1qfx_A_1471qfx   A     GOLGLYCEROL R - 162
1qfx_A_1471qfx   A     GOLGLYCEROL K - 163
1qo0_A_1421qo0   A     BMDBUTYRAMIDE Y - 150
1qo0_A_1421qo0   A     BMDBUTYRAMIDE Y - 152
1qo0_A_1421qo0   A     BMDBUTYRAMIDE P - 153
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oi2_A_1091oi2   A AC1GOL BINDING SITE FOR CHAIN AK - 114
1oi2_A_1091oi2   A AC1GOL BINDING SITE FOR CHAIN AY - 116
1oi2_A_1091oi2   A AC1GOL BINDING SITE FOR CHAIN AD - 119
1qo0_A_1421qo0   A LGABUTYRAMIDE BINDING SITEY - 150
1qo0_A_1421qo0   A LGABUTYRAMIDE BINDING SITEY - 152

Clusters included in this Subclass
CLUSTER: EH.1.45
CLUSTER: EH.2.112
CLUSTER: EH.2.96
CLUSTER: EH.3.48
CLUSTER: EH.3.84