Logo
Information on SUBCLASS 3.6.3
Subclass Accession number: 1174
Subclass: 3.6.3 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 8.1 +/- 11.3
Average RMSD (Å) : 0.758 +/- 0.162

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbappaa
Pattern: xxx[acgitv][DKNPST]xxxx
Conservation:0.298-0.570-0.413-0.6722.555-0.161-0.392-0.167-0.478
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fpz_A_741fpz   A7684FVFCTRGELEE---HHHHbbaxxaaaa
1h30_A_5961h30   A596604QSEVSAAQLEESS-HHHHxxabxaaaa
1kqf_C_61kqf   C715IVRTKFIDREE-S-HHHHbxabxaaaa
1lw3_A_3161lw3   A319327FDARPSVNAEE-S-HHHHbxaxxaaaa
1lyv_A_2821lyv   A283291AVLASSSEIEE-S-HHHHbbaxxaaaa
1m1f_A_221m1f   A2634LIVTPAAFNEE-S-HHHHbxaxxaaaa
1md6_A_781md6   A7987LEPVNIMELEES--HHHHxbabxaaaa
1mki_A_2321mki   A232240EQVIPKDVAEE-S-HHHHbxabpaaaa
1nar_*_501nar   -5563EESWDVELFEE-S-HHHHbxaxxaaaa
1nzj_A_981nzj   A100108YCTCTRARIEE---HHHHxbaxxaaaa
1qme_A_2601qme   A262270YTTISSPLQEES--HHHHxxaxbaaaa
1r9c_A_1161r9c   A119127LHTGTLTEREE---HHHHbbabbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE R - 9
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE T - 10
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE H - 18
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE W - 19
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE V - 21
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE V - 22
1kqf_C_61kqf   C     CDLCARDIOLIPIN V - 22
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE F - 25
1kqf_C_61kqf   C     CDLCARDIOLIPIN F - 25
1kqf_C_61kqf   C     CDLCARDIOLIPIN F - 26
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE V - 28
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE A - 29
1kqf_C_61kqf   C     CDLCARDIOLIPIN A - 29
1kqf_C_61kqf   C     CDLCARDIOLIPIN L - 30
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE S - 31
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE G - 32
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE I - 33
1kqf_C_61kqf   C     CDLCARDIOLIPIN I - 33
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE F - 35
1kqf_C_61kqf   C     HEMPROTOPORPHYRIN IX CONTAINING FE F - 36
1kqf_C_61kqf   C     CDLCARDIOLIPIN F - 36
1lw3_A_3161lw3   A     PO4PHOSPHATE ION A - 321
1lw3_A_3161lw3   A     PO4PHOSPHATE ION R - 322
1lw3_A_3161lw3   A     PO4PHOSPHATE ION P - 323
1lw3_A_3161lw3   A     PO4PHOSPHATE ION N - 326
1lw3_A_3161lw3   A     PO4PHOSPHATE ION A - 327
1lw3_A_3161lw3   A     PO4PHOSPHATE ION A - 329
1lw3_A_3161lw3   A     PO4PHOSPHATE ION N - 330
1lyv_A_2821lyv   A     PO4PHOSPHATE ION E - 290
1mki_A_2321mki   A     MSESELENOMETHIONINE V - 234
1mki_A_2321mki   A     MSESELENOMETHIONINE I - 235
1mki_A_2321mki   A     MSESELENOMETHIONINE P - 236
1mki_A_2321mki   A     MSESELENOMETHIONINE V - 239
1mki_A_2321mki   A     MSESELENOMETHIONINE L - 242
1mki_A_2321mki   A     MSESELENOMETHIONINE A - 243
1mki_A_2321mki   A     MSESELENOMETHIONINE K - 244
1mki_A_2321mki   A     MSESELENOMETHIONINE A - 245
1nzj_A_981nzj   A     ZNZINC ION Y - 99
1nzj_A_981nzj   A     ZNZINC ION Y - 100
1nzj_A_981nzj   A     ZNZINC ION C - 101
1nzj_A_981nzj   A     ZNZINC ION T - 102
1nzj_A_981nzj   A     ZNZINC ION C - 103
1nzj_A_981nzj   A     ZNZINC ION R - 107
1nzj_A_981nzj   A     ZNZINC ION I - 108
1r9c_A_1161r9c   A     MNMANGANESE (II) ION E - 118

Clusters included in this Subclass
CLUSTER: EH.3.44