Information on SUBCLASS 4.25.1 |
Subclass Accession number: 1310
Subclass: 4.25.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.18 (>75 %) GO : GO:0004364 (>75 %) GO:0016614 (>50 %) GO:0016616 (>50 %) GO:0016765 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51751 (>75 %) 52832 (>75 %) 52833 (>75 %) 52862 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 12.3 +/- 15.5 Average RMSD (Å) : 0.940 +/- 0.313 Consensus geometry
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Consensus Sequence: | hphXDpXX |
(φψ)-conformation: | bbpbapaa |
Pattern: | x | [dty] | x | x | [ADKS] | [GIMWY] | [DGSV] | [DY] | [DERS] | [KPRT] | [AKQS] | [dqr] | [filv] |
Conservation: | -1.073 | -0.912 | -0.358 | 0.210 | 0.133 | -0.975 | -0.544 | 2.775 | 0.715 | 0.228 | 0.380 | -0.328 | -0.253 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hh2_P_269 | 1hh2 | P | 270 | 282 | LDVLKWSDDPKQL | EEEEE--SSHHHH | bxxbxxbaxaaaa |
1i52_A_76 | 1i52 | A | 76 | 88 | ITVVDGGDERADS | EEEEE--SSHHHH | bbbbxxbabaaaa |
1k0r_A_254 | 1k0r | A | 255 | 267 | IDIIDYDDDPARF | EEEEE--SSHHHH | bxxbxxbaxaaaa |
1ltq_A_271 | 1ltq | A | 271 | 283 | DVKLAIDDRTQVV | EEEEEEE--HHHH | xxabbbbaxaaaa |
1pfo_*_178 | 1pfo | - | 180 | 192 | QYSESMVYSKSQI | EEEEEE---HHHH | bbbbbxbabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | G - 81 |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | G - 82 |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | D - 83 |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | E - 84 |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 85 |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | S - 88 |
1i52_A_76 | 1i52 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | V - 89 |
1ltq_A_271 | 1ltq | A | MSESELENOMETHIONINE | T - 280 |
1ltq_A_271 | 1ltq | A | MSESELENOMETHIONINE | Q - 281 |
1ltq_A_271 | 1ltq | A | MSESELENOMETHIONINE | V - 282 |
1ltq_A_271 | 1ltq | A | MSESELENOMETHIONINE | V - 283 |
Clusters included in this Subclass |
CLUSTER: EH.3.114 |