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PDB code:

Information on SUBCLASS 2.2.1

Subclass Accession number: 1648 Subclass: 2.2.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 28 Average sequence ID (%) : 16.8 +/- 19.2 Average RMSD (Å) : 0.571 +/- 0.216 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aoz_A_36	1aoz	A	38	44	ANAGDSV	EETT-EE	bbxgxxb
1bhe_*_204	1bhe	-	205	211	DPMSSKN	EEES-EE	bwblbbl
1bn8_A_186	1bn8	A	187	193	TINGGTH	EEES-EE	bxbvxbl
1bn8_A_282	1bn8	A	282	288	RVRFGQV	EESS-EE	bbbgxxb
1ex0_A_74	1ex0	A	76	82	VRRGQSF	EETTSEE	bbxvbxb
1g6h_A_29	1g6h	A	30	36	VNKGDVT	EETT-EE	bxpvxxx
1gw0_A_69	1gw0	A	71	77	ANWGDTV	EETT-EE	bbpgxbb
1hn0_A_74	1hn0	A	79	85	WKGGSSF	EETT-EE	bbpvxbb
1iby_A_39	1iby	A	42	48	VKKGDAV	EETT-EE	bbpvxxb
1ih7_A_259	1ih7	A	264	270	TLFGISV	EETT-EE	xbpvbbx
1k3i_A_553	1k3i	A	554	560	VKVGGRI	EETT-EE	bxpvxbb
1k4z_A_1478	1k4z	A	1480	1486	YTSCSTA	EEES-EE	bbblbbl
1kbv_A_72	1kbv	A	74	80	VREGDTV	EETT-EE	bbpgxbb
1kv7_A_472	1kv7	A	474	480	KVEGNVS	EESSSEE	xbbvbbb
1kv7_A_77	1kv7	A	80	86	LQRGKAV	EETT-EE	bbpvbbb
1lmi_A_5	1lmi	A	7	13	GKLGSEL	EETT-EE	bxpvbxb
1m56_B_198	1m56	B	200	206	VPVNKTV	EETT-EE	bxpvbxb
1n0w_A_117	1n0w	A	117	123	IETGSIT	EETTSEE	xxxvbxb
1nep_A_28	1nep	A	30	36	LHRGQSY	EETT-EE	bxxvbbx
1oe1_A_227	1oe1	A	229	235	AKVGETV	EETT-EE	bbpvxbb
1oe1_A_67	1oe1	A	69	75	VHEGDYV	EETT-EE	bbpvxbx
1pe9_A_244	1pe9	A	244	250	RVRYGSI	EESS-EE	bbbgxbb
1qb0_A_436	1qb0	A	436	442	HIKTAVN	EETT-EE	bxpvxbx
1qft_A_43	1qft	A	43	48	.GNDFTC	.EET-EE	.exlxbl
1qhq_A_34	1qhq	A	37	43	LPANTVV	EETT-EE	bwxlbxb
1qre_A_155	1qre	A	155	161	AAIGVTI	EEES-EE	bbbvbbx
1rhs_*_203	1rhs	-	203	209	HIRGSVN	EETT-EE	bxpvxbb
2cua_A_95	2cua	A	97	103	VPQGAEI	EETTSEE	bxxvxxb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1aoz_A_36	1aoz	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 45
1bn8_A_186	1bn8	A	CACALCIUM ION	T - 187
1ex0_A_74	1ex0	A	PGO1,2-PROPANEDIOL	V - 84
1ex0_A_74	1ex0	A	PGO1,2-PROPANEDIOL	Q - 85
1gw0_A_69	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	I - 82
1gw0_A_69	1gw0	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 84
1n0w_A_117	1n0w	A	MSESELENOMETHIONINE	I - 117
1n0w_A_117	1n0w	A	MGMAGNESIUM ION	I - 117
1n0w_A_117	1n0w	A	MGMAGNESIUM ION	E - 118
1n0w_A_117	1n0w	A	EDO1,2-ETHANEDIOL	I - 122
1n0w_A_117	1n0w	A	MSESELENOMETHIONINE	T - 123
1nep_A_28	1nep	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 39
1nep_A_28	1nep	A	NAGN-ACETYL-D-GLUCOSAMINE	T - 41
1oe1_A_67	1oe1	A	PCAPYROGLUTAMIC ACID	Y - 74
1qft_A_43	1qft	A	HSMHISTAMINE	V - 51

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gw0_A_69	1gw0	A	DC9NAG BINDING SITE FOR CHAIN B	E - 78
1gw0_A_69	1gw0	A	AC7NAG BINDING SITE FOR CHAIN A	N - 84

Clusters included in this Subclass

CLUSTER: AR.2.14

CLUSTER: AR.3.102

CLUSTER: AR.4.145

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