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Information on SUBCLASS 3.2.8
Subclass Accession number: 1694
Subclass: 3.2.8 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 11.1 +/- 15.0
Average RMSD (Å) : 0.580 +/- 0.217

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: phpppXX
(φψ)-conformation: bpabpbb
Pattern: [ACY][kqt][ASV]x[KNST][DENST]x[dstv][ILW]
Conservation:1.018-0.3310.551-0.9770.9300.557-1.386-1.2840.923
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bd0_A_2691bd0   A269277YTAQTEEWIEE--SSEEEbbxabpbxb
1dy5_A_721dy5   A7381YQSYSTMSIEE-SS-EEEbbxaxxbxb
1e0t_A_1411e0t   A144152CKVLNNGDLEEE-S-EEEbbxabxbxx
1izo_A_2921izo   A295303ALVKKDFVWEEE-S-EEEbbxabpbbb
1pkl_A_1601pkl   A163171CTVTNSHTIEEE-S-EEEbbxabxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dy5_A_721dy5   A     IASASPARTYL GROUP C - 72
1dy5_A_721dy5   A     IPAISOPROPYL ALCOHOL C - 72
1dy5_A_721dy5   A     ACTACETATE ION D - 83
1dy5_A_721dy5   A     ACTACETATE ION C - 84
1dy5_A_721dy5   A     ACTACETATE ION R - 85
1izo_A_2921izo   A     PAMPALMITOLEIC ACID F - 292
1izo_A_2921izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 293
1izo_A_2921izo   A     PAMPALMITOLEIC ACID L - 293

Clusters included in this Subclass
CLUSTER: AR.4.79