Information on SUBCLASS 3.2.8 |
Subclass Accession number: 1694
Subclass: 3.2.8 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 11.1 +/- 15.0 Average RMSD (Å) : 0.580 +/- 0.217 Consensus geometry
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Consensus Sequence: | phpppXX |
(φψ)-conformation: | bpabpbb |
Pattern: | [ACY] | [kqt] | [ASV] | x | [KNST] | [DENST] | x | [dstv] | [ILW] |
Conservation: | 1.018 | -0.331 | 0.551 | -0.977 | 0.930 | 0.557 | -1.386 | -1.284 | 0.923 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bd0_A_269 | 1bd0 | A | 269 | 277 | YTAQTEEWI | EE--SSEEE | bbxabpbxb |
1dy5_A_72 | 1dy5 | A | 73 | 81 | YQSYSTMSI | EE-SS-EEE | bbxaxxbxb |
1e0t_A_141 | 1e0t | A | 144 | 152 | CKVLNNGDL | EEE-S-EEE | bbxabxbxx |
1izo_A_292 | 1izo | A | 295 | 303 | ALVKKDFVW | EEE-S-EEE | bbxabpbbb |
1pkl_A_160 | 1pkl | A | 163 | 171 | CTVTNSHTI | EEE-S-EEE | bbxabxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dy5_A_72 | 1dy5 | A | IASASPARTYL GROUP | C - 72 |
1dy5_A_72 | 1dy5 | A | IPAISOPROPYL ALCOHOL | C - 72 |
1dy5_A_72 | 1dy5 | A | ACTACETATE ION | D - 83 |
1dy5_A_72 | 1dy5 | A | ACTACETATE ION | C - 84 |
1dy5_A_72 | 1dy5 | A | ACTACETATE ION | R - 85 |
1izo_A_292 | 1izo | A | PAMPALMITOLEIC ACID | F - 292 |
1izo_A_292 | 1izo | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 293 |
1izo_A_292 | 1izo | A | PAMPALMITOLEIC ACID | L - 293 |
Clusters included in this Subclass |
CLUSTER: AR.4.79 |