Information on SUBCLASS 1.2.6 |
Subclass Accession number: 2084
Subclass: 1.2.6 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) |
Number of loops: 14 Average sequence ID (%) : 10.8 +/- 12.7 Average RMSD (Å) : 0.543 +/- 0.183 Consensus geometry
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Consensus Sequence: | XXpXX |
(φψ)-conformation: | aabaa |
Pattern: | x | x | [filv] | x | [aeknqst] | [dhns] | x | x | x | x | [adegkst] |
Conservation: | -0.196 | -0.287 | 1.276 | -0.849 | 0.624 | 2.169 | -0.295 | -0.262 | -1.108 | -1.026 | -0.046 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_777 | 1a8i | - | 788 | 798 | SALYKNPREWT | HHHHT-HHHHH | aaaaabaaaaa |
1gcv_A_4 | 1gcv | A | 15 | 25 | QVLAKSPEAYG | HHHHH-HHHHH | aaaaabaaaaa |
1hrd_A_33 | 1hrd | A | 34 | 44 | PVVDAHPEYEE | HHHHT-HHHHH | aaaaabaaaaa |
1ju3_A_185 | 1ju3 | A | 193 | 203 | AAILNDVAGAA | HHHHH-HHHHH | aaaaabaaaaa |
1kic_A_185 | 1kic | A | 185 | 195 | WNIYWDPASAK | HHHHH-HHHHH | aaaaabaaaaa |
1m15_A_288 | 1m15 | A | 288 | 298 | PKLAKDRKVLE | HHHHHSHHHHH | aaaaabaaaaa |
1mba_*_4 | 1mba | - | 15 | 25 | APVFANKNANG | HHHHHTHHHHH | aaaaabaaaaa |
1msw_D_670 | 1msw | D | 684 | 694 | SVSVTVVAAVE | HHHHH-HHHHH | aaaaabaaaaa |
1on2_A_107 | 1on2 | A | 118 | 128 | QYFEEDDARKK | HHHHT-HHHHH | aaaaabaaaaa |
1r7i_A_135 | 1r7i | A | 141 | 151 | LANRKDQLLNS | HHHHHTHHHHH | aaaaabaaaaa |
1vj5_A_390 | 1vj5 | A | 393 | 403 | AELEQNLSRTF | HHHHHTHHHHH | aaaaabaaaaa |
2gdm_*_5 | 2gdm | - | 16 | 26 | EEFNANIPKHT | HHHHTTHHHHH | aaaaabaaaaa |
5csm_A_161 | 5csm | A | 167 | 177 | AKFQSDIPLYT | HHHHT-HHHHH | aaaaabaaaaa |
5rub_A_431 | 5rub | A | 435 | 445 | RAFESFPGDAD | HHHHHSHHHHH | aaaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gcv_A_4 | 1gcv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 32 |
1gcv_A_4 | 1gcv | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 33 |
1kic_A_185 | 1kic | A | NOSINOSINE | W - 185 |
1kic_A_185 | 1kic | A | CACALCIUM ION | N - 186 |
1kic_A_185 | 1kic | A | NOSINOSINE | N - 186 |
1mba_*_4 | 1mba | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 28 |
1vj5_A_390 | 1vj5 | A | CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA | L - 406 |
2gdm_*_5 | 2gdm | * | OXYOXYGEN MOLECULE | F - 29 |
2gdm_*_5 | 2gdm | * | OXYOXYGEN MOLECULE | F - 30 |
2gdm_*_5 | 2gdm | * | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 33 |
Clusters included in this Subclass |
CLUSTER: HH.0.30 |
CLUSTER: HH.0.31 |
CLUSTER: HH.1.37 |
CLUSTER: HH.2.80 |