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Information on SUBCLASS 0.1.23
Subclass Accession number: 2573
Subclass: 0.1.23 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 25.6 +/- 27.3
Average RMSD (Å) : 0.475 +/- 0.238

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: hpXX
(φψ)-conformation: bbaa
Pattern: [hlv][ILPTV][DSTY][adnstv][anr][hs][ailm][DE][enpqs][aily][ikm]
Conservation:-0.201-0.026-0.050-0.9120.0041.386-0.3252.329-0.915-0.629-0.662
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkp_A_2101bkp   A222232HVYTRHIDNLKEEEGGGHHHHHwbxaaaaaaaa
1hvy_A_2441hvy   A256266HIYLNHIEPLKEEEGGGHHHHHbbxaaaaaaaa
1j3k_C_5391j3k   C551561HVYNNHIDSLKEEEGGGHHHHHbbxaaaaaaaa
1ja1_A_1441ja1   A144154DPTDNAQDFYDEE-GGGHHHHHxwxaaaaaaaa
1nij_A_1201nij   A129139LVDAVHADEQMEEETTTHHHHHxbxaaaaaaaa
1oao_A_3301oao   A331341VTSFASQELAIEE-GGGHHHHHabbaaaaaaaa
1qqq_A_1951qqq   A207217HLYSNHMDQTHEEEGGGHHHHHbbxaaaaaaaa
1tsy_*_2471tsy   -259269HLYVNHLDQIKEEEGGGHHHHHbbxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hvy_A_2441hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 256
1hvy_A_2441hvy   A     D16TOMUDEX Y - 258
1hvy_A_2441hvy   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Y - 258
1j3k_C_5391j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 551
1j3k_C_5391j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Y - 553
1ja1_A_1441ja1   A     FMNFLAVIN MONONUCLEOTIDE D - 144
1ja1_A_1441ja1   A     FMNFLAVIN MONONUCLEOTIDE T - 146
1oao_A_3301oao   A     XCCFE(4)-NI(1)-S(4) CLUSTER F - 334
1oao_A_3301oao   A     FE2FE (II) ION F - 334
1oao_A_3301oao   A     GOLGLYCEROL E - 338
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE W - 201
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE G - 203
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE G - 204
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE D - 205
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE T - 206
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE H - 207
1qqq_A_1951qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 208
1qqq_A_1951qqq   A     CXMN-CARBOXYMETHIONINE Q - 219
1tsy_*_2471tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE H - 259
1tsy_*_2471tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Y - 261

Clusters included in this Subclass
CLUSTER: EH.2.139
CLUSTER: EH.3.126