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Information on SUBCLASS 2.5.1
Subclass Accession number: 2839
Subclass: 2.5.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 24

Average sequence ID (%) : 18.5 +/- 18.6
Average RMSD (Å) : 0.567 +/- 0.206

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXGpXX
(φψ)-conformation: bbepaa
Pattern: x[afilvwy]x[DG]xx[adegnpqst][cdehnqty][AFGILMTV]
Conservation:-0.523-0.215-0.4202.613-0.380-0.658-0.280-0.1380.001
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1apy_B_2291apy   B232240AATGNGDILEEEE-HHHHbbbexaaaa
1g0u_G_751g0u   G7785VVNGPIPDAEEES-HHHHbbbepaaaa
1g3k_A_421g3k   A4553GFAGGTADAEEES-HHHHbbbexaaaa
1id0_A_3711id0   A371379SFVGEQNDFEEES-HHHHObbexaaaa
1iug_A_521iug   A5563ILTGSGTLAEEES-HHHHxbxexaaaa
1j5p_A_1451j5p   A147155VFEGSVEEAEEEE-HHHHabbexaaaa
1j8f_A_3171j8f   A319327AWLGECDQGEEES-HHHHbbxexaaaa
1jj2_I_451jj2   I4553VITGREEQIEEES-HHHHbbxexaaaa
1jj7_A_7191jj7   A721729REGGTHQQLEEEE-HHHHabbexaaaa
1m1n_B_851m1n   B8896YVHGSQGCVEEES-HHHHbbxexaaaa
1m32_A_561m32   A6068LLQGSGSYAEEES-HHHHbbxexaaaa
1m4y_A_421m4y   A4553GFAGSVADAEEES-HHHHbbbexaaaa
1ma3_A_2291ma3   A230238KIIGKAGEVEEES-HHHHbbbexaaaa
1np7_A_811np7   A8391VTTGLPEQVEEES-HHHHbbbexaaaa
1od6_A_651od6   A6977TFSGLLVDFEE-S-HHHHxbbexaaaa
1owl_A_731owl   A7583LLQGDPQHLEEES-HHHHbbbexaaaa
1qfj_A_1771qfj   A177184.RTGTVLTA.EES-HHHH.xbebaaaa
1qjc_A_651qjc   A6977GFSDLMANFEE-S-HHHHxbbexaaaa
1r0w_A_6231r0w   A625633YFYGTFSELEEEE-HHHHabbexaaaa
1s5p_A_2521s5p   A253261KYYGPASQVEEES-HHHHbbbepaaaa
1su4_A_4331su4   A435443EKVGEATETEEES-HHHHbxbexaaaa
1ufk_A_1701ufk   A171179FLEGSLEAAEEES-HHHHbbxebaaaa
1usg_A_1961usg   A198206YYGGYYPEMEEES-HHHHbbxebaaaa
2liv_*_1962liv   -198206YYGGYHPEMEEES-HHHHbbxebaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1id0_A_3711id0   A     MGMAGNESIUM ION N - 385
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 385
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 386
1id0_A_3711id0   A     MGMAGNESIUM ION D - 388
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 388
1id0_A_3711id0   A     MGMAGNESIUM ION N - 389
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 389
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 390
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 392
1id0_A_3711id0   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Y - 393
1iug_A_521iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 59
1iug_A_521iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 60
1iug_A_521iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) T - 61
1iug_A_521iug   A     PO4PHOSPHATE ION T - 61
1iug_A_521iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) L - 62
1iug_A_521iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) M - 64
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER S - 92
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER Q - 93
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER G - 94
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER C - 95
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER V - 96
1m1n_B_851m1n   B     CACALCIUM ION Y - 98
1m1n_B_851m1n   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID Y - 98
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER Y - 98
1m1n_B_851m1n   B     CLFFE(8)-S(7) CLUSTER F - 99
1m1n_B_851m1n   B     CACALCIUM ION S - 101
1m1n_B_851m1n   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID S - 101
1m1n_B_851m1n   B     CACALCIUM ION R - 105
1m1n_B_851m1n   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID R - 105
1m1n_B_851m1n   B     CACALCIUM ION F - 107
1m32_A_561m32   A     MSESELENOMETHIONINE S - 58
1m32_A_561m32   A     MSESELENOMETHIONINE V - 59
1m32_A_561m32   A     MSESELENOMETHIONINE L - 60
1m32_A_561m32   A     MSESELENOMETHIONINE L - 61
1m32_A_561m32   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 63
1m32_A_561m32   A     MSESELENOMETHIONINE S - 64
1m32_A_561m32   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 64
1m32_A_561m32   A     MSESELENOMETHIONINE G - 65
1m32_A_561m32   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 65
1m32_A_561m32   A     MSESELENOMETHIONINE S - 66
1m32_A_561m32   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 66
1m32_A_561m32   A     MSESELENOMETHIONINE Y - 67
1m32_A_561m32   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 67
1m32_A_561m32   A     MSESELENOMETHIONINE A - 68
1m32_A_561m32   A     MSESELENOMETHIONINE V - 69
1m32_A_561m32   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 69
1m32_A_561m32   A     MSESELENOMETHIONINE E - 70
1m32_A_561m32   A     MSESELENOMETHIONINE A - 71
1m32_A_561m32   A     MSESELENOMETHIONINE L - 73
1m32_A_561m32   A     MSESELENOMETHIONINE G - 74
1od6_A_651od6   A     PNS4'-PHOSPHOPANTETHEINE F - 70
1od6_A_651od6   A     PNS4'-PHOSPHOPANTETHEINE G - 72
1od6_A_651od6   A     PNS4'-PHOSPHOPANTETHEINE L - 73
1od6_A_651od6   A     PNS4'-PHOSPHOPANTETHEINE L - 74
1od6_A_651od6   A     PNS4'-PHOSPHOPANTETHEINE V - 75
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1od6_A_651od6   A AC1PNS BINDING SITE FOR CHAIN AG - 72
1od6_A_651od6   A AC1PNS BINDING SITE FOR CHAIN AL - 73
1od6_A_651od6   A AC1PNS BINDING SITE FOR CHAIN AL - 74

Clusters included in this Subclass
CLUSTER: EH.1.29
CLUSTER: EH.2.239
CLUSTER: EH.2.37