ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.77.1

Subclass Accession number: 3314
Subclass: 5.77.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %)  1 (>50 %)  3 (>50 %)  5 (>50 %)
GO : GO:0003677 (>50 %)
SCOP : 52466 (>50 %)  52467 (>50 %)  63984 (>50 %)

Number of loops: 3

Average sequence ID (%) : 39.4 +/- 31.0
Average RMSD (Å) : 1.167 +/- 0.462

Consensus geometry

d (Å): 9

delta (°): 90-135

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	pTpphpphX
(φψ)-conformation:	pbapaalaa

Pattern:	x	[CV]	[EY]	[T]	[QT]	[NT]	[IL]	[DE]	[DT]	[LV]	x
Conservation:	-1.402	-0.115	-0.351	2.084	-0.389	0.248	0.433	1.073	-0.201	0.021	-1.402

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1j8f_A_161	1j8f	A	163	173	RCYTQNIDTLE	EEEE---S-HH	bbxbaxaavaa
1ml4_A_209	1ml4	A	209	219	VVETTTLEDVI	EEEES-THHHH	bbxbaxaaaaa
1q1a_A_109	1q1a	A	111	121	RVYTQNIDTLE	EEEE--SS-HH	bbxbaxaalaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1q1a_A_109	1q1a	A	OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE	Q - 115
1q1a_A_109	1q1a	A	OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE	N - 116
1q1a_A_109	1q1a	A	OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE	I - 117

Clusters included in this Subclass

CLUSTER: EH.4.298