Information on SUBCLASS 5.10.1 |
Subclass Accession number: 368
Subclass: 5.10.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 5.3 (>75 %) 5.3.1 (>75 %) 5.3.1.1 GO : GO:0004807 (>50 %) GO:0016853 (>50 %) GO:0016860 (>50 %) GO:0016861 (>50 %) SCOP : 51351 (>75 %) 51352 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 15.3 +/- 15.2 Average RMSD (Å) : 0.943 +/- 0.428 Consensus geometry
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Consensus Sequence: | XXXPphphh |
(φψ)-conformation: | aabaapabb |
Pattern: | [iltvwy] | [deprt] | x | x | x | x | x | [ily] | x | [AEKRS] | x | [DP] | [dkns] | [AITV] | [DEGKNR] | [AFGMT] | [IV] | [lvy] | x |
Conservation: | -0.680 | -0.562 | -0.716 | 0.112 | -0.742 | -0.767 | -0.396 | -0.113 | -0.375 | 0.119 | -0.787 | 3.038 | -0.152 | 0.692 | 0.037 | -0.352 | 2.109 | 0.084 | -0.548 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e4c_P_74 | 1e4c | P | 74 | 92 | WRFHMAAYQSRPDANAVVH | HHHHHHHHHH-TT--EEEE | aaaaaaaaaabaaxabbbb |
1gud_A_177 | 1gud | A | 181 | 199 | LDVATNVLQRNPNIKAIYC | HHHHHHHHHH-TT--EEEE | aaaaaaaaaabaapabbxb |
1jx6_A_241 | 1jx6 | A | 245 | 263 | YDAAKASLAKHPDVDFIYA | HHHHHHHHHH----SEEEE | aaaaaaaaaabaababbxb |
1k0w_A_77 | 1k0w | A | 77 | 95 | TPTHRLLYQAFPSIGGIVH | HHHHHHHHHH-TT--EEEE | aaaaaaaaaabaaxabbbb |
1o50_A_23 | 1o50 | A | 23 | 41 | IEEIVDRILEDPVTRTVYV | HHHHHHHHHHSTT--EEEE | aaaaaaaaaabaaxabxbb |
2gsa_A_98 | 2gsa | A | 101 | 119 | NVLAEMVNDAVPSIEMVRF | HHHHHHHHHHSTT-SEEEE | aaaaaaaaaaxaaxabbbx |
2scu_B_295 | 2scu | B | 298 | 316 | VTEAFKIILSDDKVKAVLV | HHHHHHHHHHSSS--EEEE | aaaaaaaaaaxaaxabbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e4c_P_74 | 1e4c | P | ZNZINC ION | F - 76 |
1e4c_P_74 | 1e4c | P | ZNZINC ION | H - 92 |
1e4c_P_74 | 1e4c | P | ZNZINC ION | N - 93 |
1gud_A_177 | 1gud | A | ZNZINC ION | D - 182 |
1gud_A_177 | 1gud | A | ZNZINC ION | N - 186 |
1k0w_A_77 | 1k0w | A | ZNZINC ION | H - 95 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4c_P_74 | 1e4c | P | ACTACTIVE CENTER DEFINDED BY THE ZINC ION AND THE FOUR ZINC COORDINATING RESIDUES | H - 92 |
1gud_A_177 | 1gud | A | ZN1ZN BINDING SITE FOR CHAIN A | D - 182 |
Clusters included in this Subclass |
CLUSTER: HE.4.236 |
CLUSTER: HE.6.26 |