Information on SUBCLASS 2.5.2 |
Subclass Accession number: 3717
Subclass: 2.5.2 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 15.7 +/- 18.5 Average RMSD (Å) : 0.833 +/- 0.132 Consensus geometry
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Consensus Sequence: | hXXXXh |
(φψ)-conformation: | bblpbb |
Pattern: | x | x | [iltv] | [AGILY] | x | [agn] | [anq] | x | [AFIV] | [DEGNQST] | [DGKR] | [itv] | x | x |
Conservation: | -1.160 | -0.265 | 0.666 | -0.149 | -1.337 | 1.507 | 0.093 | -0.639 | 1.335 | 0.112 | 0.236 | 1.611 | -1.303 | -0.707 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cf3_A_242 | 1cf3 | A | 242 | 255 | LQVLTGQYVGKVLL | EEEEES-EEEEEEE | bbbbbvbxxabxxb |
1ee6_A_115 | 1ee6 | A | 116 | 129 | TINIRNFRADDIGK | EEEEES-EEEEEEE | bbbbblbbbbvbab |
1gpe_A_246 | 1gpe | A | 246 | 259 | LEILTGQMVGKVLF | EEEEES-EEEEEEE | bbbbbvbbxabxxb |
1ju2_A_209 | 1ju2 | A | 209 | 222 | LRVGVHASVEKIIF | EEEEES-EEEEEEE | bbbbblbxxabxxb |
1k5c_A_207 | 1k5c | A | 210 | 223 | NVVIKGNTVTRSMY | EEEEES-EEEEEEE | lbbbbvxbbblbab |
1k5c_A_237 | 1k5c | A | 240 | 253 | GVTYDANTISGIAK | EEEEES-EEEEEEE | vbbbbvxbbbvxaa |
1pe9_A_227 | 1pe9 | A | 227 | 240 | HVTLFNNVFNRVTE | EEEEES-EEEEEEE | xbbbblbbbblbab |
1qcx_A_267 | 1qcx | A | 268 | 281 | YVLAEGNVFQDVNV | EEEEES-EEEEEEE | bbbbbvxbbblbab |
3lad_A_236 | 3lad | A | 236 | 249 | LKILLGARVTGTEV | EEEEET-EEEEEEE | xbxbxvxbxabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cf3_A_242 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 248 |
1cf3_A_242 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 249 |
1cf3_A_242 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 250 |
1cf3_A_242 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 251 |
1gpe_A_246 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 252 |
1gpe_A_246 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 253 |
1gpe_A_246 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 254 |
1gpe_A_246 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 255 |
1ju2_A_209 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 215 |
1ju2_A_209 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 216 |
1ju2_A_209 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 217 |
1ju2_A_209 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 218 |
1k5c_A_237 | 1k5c | A | GOLGLYCEROL | S - 261 |
Clusters included in this Subclass |
CLUSTER: AR.1.39 |
CLUSTER: AR.2.58 |
CLUSTER: AR.3.69 |