Information on SUBCLASS 3.16.1 |
Subclass Accession number: 3852
Subclass: 3.16.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 42.9 +/- 27.1 Average RMSD (Å) : 0.369 +/- 0.149 Consensus geometry
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Consensus Sequence: | FpPpphp |
(φψ)-conformation: | bbwapbb |
Pattern: | [lv] | x | [c] | x | [ailmv] | x | [dgns] | [f] | [fhmy] | [p] | [adegkrs] | [dehnps] | [aiv] | [aeknst] | [lv] | [dekqst] | [lw] | x | x |
Conservation: | 0.080 | -0.731 | 2.345 | -0.840 | -0.388 | -0.697 | -0.242 | 1.280 | 0.275 | 1.635 | -0.692 | -0.613 | 0.045 | -0.779 | 0.076 | -0.664 | 1.652 | -0.794 | -0.948 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bec_*_145 | 1bec | - | 145 | 163 | LVCLARGFFPDHVELSWWV | EEEEEEEEBS--EEEEEEE | bbbbbbvbbwaxbbbbbbb |
1c5c_L_129 | 1c5c | L | 132 | 150 | VVCLLNNFYPREAKVQWKV | EEEEEEEEBSS--EEEEEE | bbbbbblbbwaxbbbbbbb |
1dqd_L_128 | 1dqd | L | 131 | 149 | VVCFLNNFYPRDINVKWKI | EEEEEEEEBSS--EEEEEE | bbbbbblbbwaxbbbbbbb |
1fp5_A_460 | 1fp5 | A | 462 | 480 | LACLIQNFMPEDISVQWLH | EEEEEEEEBSS--EEEEEE | bbbbbbvbbwaxbbbbbbb |
1je6_A_197 | 1je6 | A | 200 | 218 | VTCRASSFYPRNITLTWRQ | EEEEEEEEBSS--EEEEEE | bbbbbblbbwaxbbbbxbx |
1k5n_A_198 | 1k5n | A | 201 | 219 | LRCWALGFYPAEITLTWQR | EEEEEEEEBSS--EEEEEE | bbbbbbvbbwapbbbbbbb |
1k5n_B_21 | 1k5n | B | 23 | 41 | LNCYVSGFHPSDIEVDLLK | EEEEEEEEBSS--EEEEEE | bbbbbbvbbwaxbbbbbbb |
1k8d_A_198 | 1k8d | A | 201 | 219 | LRCWALGFYPADITLTWQL | EEEEEEEESSS--EEEEEE | xbxbbblbbwaxbbbbbbb |
1kcv_L_129 | 1kcv | L | 132 | 150 | VVCFLNSFYPKSIAVKWKV | EEEEEEEEBSS--EEEEEE | bbbbbblbbwaxbbbbbbb |
1l6x_A_362 | 1l6x | A | 365 | 383 | LTCLVKGFYPSDIAVEWES | EEEEEEEEBSS--EEEEEE | bbbxbbvxbwaxbbbbbbb |
1lk2_A_198 | 1lk2 | A | 201 | 219 | LRCWALGFYPADITLTWQL | EEEEEEEEBSS--EEEEEE | bbxbbbvbbwaxbbbbbbb |
1lk3_L_128 | 1lk3 | L | 131 | 149 | VVCLMNNFYPRDISVKWKI | EEEEEEEEBSS--EEEEEE | bbbbbblbbwaxbbbbxbb |
1mju_L_129 | 1mju | L | 132 | 150 | VVCFLNNFYPKDINVKWKI | EEEEEEEEBSS--EEEEEE | bbbbbblbbwaxbbbbbbb |
1nj9_A_131 | 1nj9 | A | 133 | 151 | LVCTITDFYPGVVTVDWKV | EEEEEEEESSS--EEEEEE | xbbxbblbbwabbbbbxbb |
1onq_A_201 | 1onq | A | 204 | 222 | LVCHVSGFYPKPVWVMWMR | EEEEEEEEBSS--EEEEEE | xbbxbbvbbwapbbbbxbb |
1q0x_L_129 | 1q0x | L | 132 | 150 | LVCTITDFYPGVVTVDWKV | EEEEEEEEBSS--EEEEEE | xbbxbblbbwabbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c5c_L_129 | 1c5c | L | GOLGLYCEROL | V - 133 |
1c5c_L_129 | 1c5c | L | GOLGLYCEROL | C - 134 |
1k5n_A_198 | 1k5n | A | GOLGLYCEROL | A - 211 |
1lk2_A_198 | 1lk2 | A | MPD2-METHYL-2,4-PENTANEDIOL | W - 204 |
1lk2_A_198 | 1lk2 | A | MPD2-METHYL-2,4-PENTANEDIOL | L - 206 |
Clusters included in this Subclass |
CLUSTER: AR.4.42 |
CLUSTER: AR.6.17 |