Information on SUBCLASS 4.21.1 |
Subclass Accession number: 3949
Subclass: 4.21.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 26.7 +/- 24.1 Average RMSD (Å) : 0.700 +/- 0.515 Consensus geometry
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Consensus Sequence: | pXhpXXpX |
(φψ)-conformation: | bbpababb |
Pattern: | x | [DSY] | [AST] | [PY] | [KR] | [FLTY] | [akqs] | [HNWY] | x | [GSV] | x | [flm] |
Conservation: | -0.638 | -0.248 | 0.419 | 1.462 | 2.192 | -0.329 | -0.807 | 0.381 | 0.234 | -1.109 | -0.857 | -0.700 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gqi_A_145 | 1gqi | A | 147 | 158 | SSAPRLQHRVVN | EE--S-SEEEEE | bbbxababbbbb |
1jak_A_143 | 1jak | A | 146 | 157 | EDTPRYAWRSAM | EE--S-SEEEEE | bbbxababbbbb |
1now_A_187 | 1now | A | 195 | 206 | IDSPRFSHRGIL | EE--S-SEEEEE | bbbxababbbbx |
1qba_*_326 | 1qba | - | 333 | 344 | SDAPRFPYRGIF | EE--S-SEEEEE | bbbxababbbbb |
1qpb_A_298 | 1qpb | A | 298 | 309 | SYSYKTKNIVEF | EE--S---EEEE | bbbxaxaxbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gqi_A_145 | 1gqi | A | EDO1,2-ETHANEDIOL | L - 146 |
1gqi_A_145 | 1gqi | A | EDO1,2-ETHANEDIOL | S - 148 |
1jak_A_143 | 1jak | A | IFG(2R,3R,4S,5R)-2-ACETAMIDO-3,4-DIHYDROXY-5-HYDROXYMETHYL-PIPERIDINIUM | D - 159 |
1now_A_187 | 1now | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 190 |
1now_A_187 | 1now | A | GOLGLYCEROL | I - 195 |
1now_A_187 | 1now | A | GOLGLYCEROL | D - 196 |
1now_A_187 | 1now | A | IFG(2R,3R,4S,5R)-2-ACETAMIDO-3,4-DIHYDROXY-5-HYDROXYMETHYL-PIPERIDINIUM | D - 208 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gqi_A_145 | 1gqi | A | AC4EDO BINDING SITE FOR CHAIN A | S - 148 |
Clusters included in this Subclass |
CLUSTER: AR.5.98 |