Information on SUBCLASS 1.3.6 |
Subclass Accession number: 4467
Subclass: 1.3.6 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 8.8 +/- 12.1 Average RMSD (Å) : 0.433 +/- 0.172 Consensus geometry
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Consensus Sequence: | XXXhX |
(φψ)-conformation: | aalaa |
Pattern: | x | [afilvwy] | x | [adegknqs] | x | x | [adegknq] | [ailpvy] | x | [aeknq] | x |
Conservation: | 0.545 | -0.132 | -0.149 | -0.868 | 0.177 | -0.681 | 1.322 | 0.197 | -1.672 | 1.863 | -0.602 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8h_*_400 | 1a8h | - | 416 | 426 | RYINEKKPWEL | HHHHHH-HHHH | aaaaaalaaaa |
1ag9_A_150 | 1ag9 | A | 163 | 173 | QISEELHLDEI | HHHHHHTHHHH | aaaaaavaaaa |
1brt_*_156 | 1brt | - | 163 | 173 | FFNDFYNLDEN | HHHHHTTHHHH | aaaaaalaaaa |
1dl2_A_235 | 1dl2 | A | 237 | 247 | PLYKNNDLLNT | HHHHHHTHHHH | aaaaaalaaaa |
1ejx_C_1494 | 1ejx | C | 1494 | 1504 | QAAAANGVAER | HHHHHTTHHHH | aaaaaavaaaa |
1ffv_B_440 | 1ffv | B | 446 | 456 | KVLDAVDYPAL | HHHHHHTHHHH | aaaaaalaaaa |
1gpc_*_88 | 1gpc | - | 91 | 101 | QYISKNDLYNT | HHHHHTTHHHH | aaaaaalaaaa |
1gqe_A_6 | 1gqe | A | 20 | 30 | VLRGYLDYDAK | HHHHHTTHHHH | aaaaaalaaaa |
1jmx_A_423 | 1jmx | A | 423 | 433 | ERAVEDEDVKF | HHHHHTTHHHH | aaaaaalaaaa |
1k2x_B_233 | 1k2x | B | 234 | 244 | EVFIRALAAYD | HHHHHTTHHHH | aaaaaalaaaa |
1l5j_A_141 | 1l5j | A | 147 | 157 | MQSWADAEWFL | HHHHHTTHHHH | aaaaaavaaaa |
1lw3_A_525 | 1lw3 | A | 526 | 536 | QQRGKENLPKR | HHHHHTTHHHH | aaaaaalaaaa |
1n62_B_443 | 1n62 | B | 449 | 459 | KAMDTVGYHQL | HHHHHHTHHHH | aaaaaavaaaa |
1tml_*_165 | 1tml | - | 170 | 180 | SWLQQADISNS | HHHHHTTHHHH | aaaaaalaaaa |
3pmg_A_531 | 3pmg | A | 541 | 551 | IALKVSQLQER | HHHHHHTHHHH | aaaaaalaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ag9_A_150 | 1ag9 | A | CACALCIUM ION | P - 150 |
1ag9_A_150 | 1ag9 | A | BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | P - 150 |
1ag9_A_150 | 1ag9 | A | CACALCIUM ION | T - 153 |
1ag9_A_150 | 1ag9 | A | BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | T - 153 |
1ag9_A_150 | 1ag9 | A | CACALCIUM ION | A - 154 |
1ag9_A_150 | 1ag9 | A | BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | A - 154 |
1gpc_*_88 | 1gpc | * | ZNZINC ION | P - 88 |
1gpc_*_88 | 1gpc | * | ZNZINC ION | V - 89 |
1gpc_*_88 | 1gpc | * | ZNZINC ION | C - 90 |
1gpc_*_88 | 1gpc | * | ZNZINC ION | Q - 91 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | L - 14 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | S - 18 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | R - 22 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | Y - 24 |
Clusters included in this Subclass |
CLUSTER: HH.1.64 |
CLUSTER: HH.2.260 |
CLUSTER: HH.2.83 |
CLUSTER: HH.3.133 |