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Information on SUBCLASS 1.3.6
Subclass Accession number: 4467
Subclass: 1.3.6 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 8.8 +/- 12.1
Average RMSD (Å) : 0.433 +/- 0.172

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: XXXhX
(φψ)-conformation: aalaa
Pattern: x[afilvwy]x[adegknqs]xx[adegknq][ailpvy]x[aeknq]x
Conservation:0.545-0.132-0.149-0.8680.177-0.6811.3220.197-1.6721.863-0.602
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8h_*_4001a8h   -416426RYINEKKPWELHHHHHH-HHHHaaaaaalaaaa
1ag9_A_1501ag9   A163173QISEELHLDEIHHHHHHTHHHHaaaaaavaaaa
1brt_*_1561brt   -163173FFNDFYNLDENHHHHHTTHHHHaaaaaalaaaa
1dl2_A_2351dl2   A237247PLYKNNDLLNTHHHHHHTHHHHaaaaaalaaaa
1ejx_C_14941ejx   C14941504QAAAANGVAERHHHHHTTHHHHaaaaaavaaaa
1ffv_B_4401ffv   B446456KVLDAVDYPALHHHHHHTHHHHaaaaaalaaaa
1gpc_*_881gpc   -91101QYISKNDLYNTHHHHHTTHHHHaaaaaalaaaa
1gqe_A_61gqe   A2030VLRGYLDYDAKHHHHHTTHHHHaaaaaalaaaa
1jmx_A_4231jmx   A423433ERAVEDEDVKFHHHHHTTHHHHaaaaaalaaaa
1k2x_B_2331k2x   B234244EVFIRALAAYDHHHHHTTHHHHaaaaaalaaaa
1l5j_A_1411l5j   A147157MQSWADAEWFLHHHHHTTHHHHaaaaaavaaaa
1lw3_A_5251lw3   A526536QQRGKENLPKRHHHHHTTHHHHaaaaaalaaaa
1n62_B_4431n62   B449459KAMDTVGYHQLHHHHHHTHHHHaaaaaavaaaa
1tml_*_1651tml   -170180SWLQQADISNSHHHHHTTHHHHaaaaaalaaaa
3pmg_A_5313pmg   A541551IALKVSQLQERHHHHHHTHHHHaaaaaalaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ag9_A_1501ag9   A     CACALCIUM ION P - 150
1ag9_A_1501ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL P - 150
1ag9_A_1501ag9   A     CACALCIUM ION T - 153
1ag9_A_1501ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 153
1ag9_A_1501ag9   A     CACALCIUM ION A - 154
1ag9_A_1501ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL A - 154
1gpc_*_881gpc   *     ZNZINC ION P - 88
1gpc_*_881gpc   *     ZNZINC ION V - 89
1gpc_*_881gpc   *     ZNZINC ION C - 90
1gpc_*_881gpc   *     ZNZINC ION Q - 91
1gqe_A_61gqe   A     MSESELENOMETHIONINE L - 14
1gqe_A_61gqe   A     MSESELENOMETHIONINE S - 18
1gqe_A_61gqe   A     MSESELENOMETHIONINE R - 22
1gqe_A_61gqe   A     MSESELENOMETHIONINE Y - 24

Clusters included in this Subclass
CLUSTER: HH.1.64
CLUSTER: HH.2.260
CLUSTER: HH.2.83
CLUSTER: HH.3.133