Information on SUBCLASS 1.7.1 |
Subclass Accession number: 4497
Subclass: 1.7.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 17.5 +/- 16.1 Average RMSD (Å) : 0.220 +/- 0.045 Consensus geometry
|
Consensus Sequence: | hpGhh |
(φψ)-conformation: | aaFaa |
Pattern: | [ASV] | x | [acfy] | [ILVY] | [ntv] | [G] | [kp] | [AILM] | [AKST] | [dekq] | x | [AILT] |
Conservation: | -0.042 | -0.689 | -0.841 | 0.188 | -0.392 | 2.963 | 0.221 | 0.070 | -0.040 | -0.511 | -0.689 | -0.239 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a99_A_203 | 1a99 | A | 203 | 214 | ADDYTGPATDLL | HHHHHTHHHHHH | aaaaaFaaaaaa |
1e9i_A_64 | 1e9i | A | 67 | 78 | VAAVNGPIAQAL | HHHHHTHHHHHH | aaaaaFaaaaaa |
1eer_A_138 | 1eer | A | 146 | 157 | SNFLRGKLKLYT | HHHHHTHHHHHH | aaaaaFaaaaaa |
1h2s_A_122 | 1h2s | A | 138 | 149 | VYYLVGPMTESA | HHHHHTHHHHHH | aaaaaFaaaaaa |
1qmg_A_353 | 1qmg | A | 353 | 364 | VECITGVISKTI | HHHHHTHHHHHH | aaaaaFaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h2s_A_122 | 1h2s | A | RETRETINAL | L - 126 |
1h2s_A_122 | 1h2s | A | RETRETINAL | F - 127 |
1h2s_A_122 | 1h2s | A | RETRETINAL | G - 130 |
1h2s_A_122 | 1h2s | A | RETRETINAL | A - 131 |
1h2s_A_122 | 1h2s | A | RETRETINAL | F - 134 |
Clusters included in this Subclass |
CLUSTER: HH.0.39 |