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Information on SUBCLASS 2.6.1
Subclass Accession number: 4624
Subclass: 2.6.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 28.2 +/- 22.4
Average RMSD (Å) : 0.643 +/- 0.260

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: pXGGhX
(φψ)-conformation: aageaa
Pattern: [filvy][aegknqrs][adeknqrt]x[G][AG][ilmptv][adekqrst][aegknqrst][acfilmtv]x
Conservation:-0.209-0.466-0.386-0.5642.2131.767-0.492-0.391-0.519-0.218-0.735
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1alq_*_1321alq   -139149IKEIGGIKKVKHHHHT-HHHHHaaaageaaaaa
1bjn_A_2431bjn   A256266LKANGGVAEMDHHHTTHHHHHHaaaageaaaaa
1bsg_*_1321bsg   -139149LRELGGPAAVTHHHHTSTHHHHaaaageaaaaa
1bt4_A_2421bt4   A255265IEERGGLEGVQHHHTTHHHHHHaaaaveaaaaa
1bue_A_1321bue   A140150ERYIGGPEGMTHHTT-HHHHHHaaaaveaaaaa
1coj_A_981coj   A105115EEDIGGLDACTHHHTS-HHHHHaaaageaaaaa
1dy6_A_1321dy6   A140150ERFLGGPEGMTHHTS-HHHHHHaaaaveaaaaa
1g6a_A_1321g6a   A139149LSAVGGPKGVTHHHTTHHHHHHaaaaveaaaaa
1gpi_A_3391gpi   A340350FAQKGGLKQMGHHHTTHHHHHHaaaageaaaaa
1i2s_A_1321i2s   A139149LKQIGGPESLKHHHTT-HHHHHaaaageaaaaa
1jpm_A_2691jpm   A269279LMKAGGISGAEHHHHTSHHHHHaaaaveaaaaa
1l5j_A_3341l5j   A338348EVRAGGRIPLIHHHHTSHHHHHaaaaveaaaaa
1m32_A_2451m32   A258268LAKEGGVAARHHHHHTHHHHHHaaaageaaaaa
1m3q_A_2041m3q   A216226LEEQGGLAWLQHHTS-SHHHHHaaaageaaaaa
1mfo_A_1321mfo   A139149LKTIGGPAAVTHHHHTSHHHHHaaaageaaaaa
1muc_A_2741muc   A274284IAKNGGPRAVLHHHHTSHHHHHaaaageaaaaa
1n9b_A_1321n9b   A139149LATVGGPAGLTHHHTTHHHHHHaaaaveaaaaa
1nu5_A_2701nu5   A270280LCNMGGIANTLHHHHTSHHHHHaaaaveaaaaa
1o7e_A_1321o7e   A139149FGVVGGPPAVTHHHHTHHHHHHaaaageaaaaa
1ojj_A_3211ojj   A323333YMELGATQGMGHHHTTHHHHHHaaaaNeaaaaa
1pq1_A_1791pq1   A182192IQENGGWDTFVHHHTTHHHHHHaaaaveaaaaa
1q2b_A_3421q2b   A343353FSDKGGLTQFKHHHTTHHHHHHaaaageaaaaa
1rtx_A_41rtx   A515YEKLGGTTAVDHHHHTSHHHHHaaaaveaaaaa
1rvk_A_2831rvk   A283293VNDVGGITPALHHHHTSHHHHHaaaaveaaaaa
1s3e_A_1821s3e   A189199VKQCGGTTRIIHHTTT-HHHHHaaaageaaaaa
3ovw_A_3213ovw   A323333YMRLGGTKQMGHHHTTHHHHHHaaaageaaaaa
7req_A_4077req   A427437VEKVGGMAKAIHHHTT-HHHHHaaaageaaaaa
7req_B_4037req   B423433VEKLGGMSKAVHHHTT-HHHHHaaaageaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i2s_A_1321i2s   A     CITCITRIC ACID N - 132
1m32_A_2451m32   A     MSESELENOMETHIONINE H - 246
1m32_A_2451m32   A     MSESELENOMETHIONINE T - 247
1m32_A_2451m32   A     MSESELENOMETHIONINE L - 249
1m32_A_2451m32   A     MSESELENOMETHIONINE A - 250
1m32_A_2451m32   A     MSESELENOMETHIONINE V - 264
1m32_A_2451m32   A     MSESELENOMETHIONINE S - 277
1m32_A_2451m32   A     MSESELENOMETHIONINE L - 278
1m32_A_2451m32   A     MSESELENOMETHIONINE V - 279
1m32_A_2451m32   A     MSESELENOMETHIONINE A - 280
1n9b_A_1321n9b   A     MPD2-METHYL-2,4-PENTANEDIOL F - 151
1n9b_A_1321n9b   A     MPD2-METHYL-2,4-PENTANEDIOL Q - 154
1o7e_A_1321o7e   A     GOLGLYCEROL G - 140
1o7e_A_1321o7e   A     GOLGLYCEROL V - 141
1o7e_A_1321o7e   A     GOLGLYCEROL V - 142
1o7e_A_1321o7e   A     GOLGLYCEROL G - 143
1rvk_A_2831rvk   A     MSESELENOMETHIONINE V - 283
1rvk_A_2831rvk   A     MSESELENOMETHIONINE N - 284
1rvk_A_2831rvk   A     MSESELENOMETHIONINE I - 289
1rvk_A_2831rvk   A     MSESELENOMETHIONINE P - 291
1rvk_A_2831rvk   A     MSESELENOMETHIONINE A - 292
1rvk_A_2831rvk   A     MSESELENOMETHIONINE L - 293
1rvk_A_2831rvk   A     MSESELENOMETHIONINE K - 294
1s3e_A_1821s3e   A     RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL Y - 188
1s3e_A_1821s3e   A     RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL I - 198
1s3e_A_1821s3e   A     RHP(3R)-3-(PROP-2-YNYLAMINO)INDAN-5-OL I - 199
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7e_A_1321o7e   A AC1GOL BINDING SITE FOR CHAIN AG - 140
1o7e_A_1321o7e   A BC5SO4 BINDING SITE FOR CHAIN AR - 153

Clusters included in this Subclass
CLUSTER: HH.1.44
CLUSTER: HH.1.65
CLUSTER: HH.2.42
CLUSTER: HH.3.46
CLUSTER: HH.4.218