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Information on SUBCLASS 2.2.9
Subclass Accession number: 479
Subclass: 2.2.9 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 12.4 +/- 17.8
Average RMSD (Å) : 0.673 +/- 0.205

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpXXXh
(φψ)-conformation: bbaabb
Pattern: x[cehns]xx[adknqs][cgilpt]
Conservation:-1.2261.6160.531-0.3620.118-0.677
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1chm_A_3291chm   A329334LSHYYGEETTEEbbaabe
1cxy_A_191cxy   A1924HSPDDCEETTEEabaabb
1d7p_M_21961d7p   M21972202TNMFATEETTEEbbaabb
1g2a_A_871g2a   A8994GCLSIPEETTEEbbaabp
1gen_*_6361gen   -640645LENQSLEETTEEbxaaba
1ixk_A_691ixk   A7277RVPWAKEETTEExxaaba
1jat_A_231jat   A2732PHDDNLEETTEExxaaba
1npe_A_11021npe   A11061111LNPAQPEETTEEbxaaba
1olz_A_481olz   A5257VNALNIEETTEEbxaaba
1poi_A_1531poi   A156161DNPFKPEETTEExxaabp
1uzb_A_521uzb   A5661LNPSAPEETTEExxaaba
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cxy_A_191cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 26
1cxy_A_191cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 28
1d7p_M_21961d7p   M     GOLGLYCEROL F - 2196
1d7p_M_21961d7p   M     GOLGLYCEROL N - 2198
1d7p_M_21961d7p   M     GOLGLYCEROL F - 2200
1d7p_M_21961d7p   M     GOLGLYCEROL A - 2201
1d7p_M_21961d7p   M     GOLGLYCEROL W - 2203
1g2a_A_871g2a   A     BB2ACTINONIN E - 87
1g2a_A_871g2a   A     BB2ACTINONIN E - 88
1g2a_A_871g2a   A     NINICKEL (II) ION G - 89
1g2a_A_871g2a   A     BB2ACTINONIN G - 89
1g2a_A_871g2a   A     NINICKEL (II) ION C - 90
1g2a_A_871g2a   A     BB2ACTINONIN C - 90
1g2a_A_871g2a   A     NINICKEL (II) ION L - 91
1g2a_A_871g2a   A     BB2ACTINONIN L - 91
1g2a_A_871g2a   A     NINICKEL (II) ION S - 92
1g2a_A_871g2a   A     BB2ACTINONIN S - 92
1g2a_A_871g2a   A     BB2ACTINONIN Q - 96
1g2a_A_871g2a   A     BB2ACTINONIN R - 97
1ixk_A_691ixk   A     MSESELENOMETHIONINE V - 73
1ixk_A_691ixk   A     MSESELENOMETHIONINE W - 75
1ixk_A_691ixk   A     MSESELENOMETHIONINE A - 76
1ixk_A_691ixk   A     MSESELENOMETHIONINE E - 78
1ixk_A_691ixk   A     MSESELENOMETHIONINE G - 79
1ixk_A_691ixk   A     MSESELENOMETHIONINE F - 80
1ixk_A_691ixk   A     MSESELENOMETHIONINE C - 81

Clusters included in this Subclass
CLUSTER: HA.1.55
CLUSTER: HA.3.48