Information on SUBCLASS 5.8.1 |
Subclass Accession number: 4896
Subclass: 5.8.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 11.1 +/- 12.9 Average RMSD (Å) : 1.079 +/- 0.297 Consensus geometry
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Consensus Sequence: | XXcXXhpXp |
(φψ)-conformation: | aalbpbpaa |
Pattern: | [adegkq] | x | x | [aegknrt] | x | x | [DGKNRS] | x | [DEHKNPR] | [filv] | [AEGKQST] | x | [adegkqst] | x | [filvy] | [adegknr] |
Conservation: | -0.393 | -0.492 | -1.333 | -0.421 | -0.778 | -0.132 | 1.933 | -1.200 | 0.934 | 1.894 | 1.105 | 0.272 | -0.442 | -0.687 | 0.311 | -0.573 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ais_B_1151 | 1ais | B | 1161 | 1176 | AACRLLKVPRTLDEIA | HHHHHHT----HHHHH | aaaaaavbwbpaaaaa |
1bg6_*_210 | 1bg6 | - | 210 | 225 | AARCESGTPFQYYLEG | HHHHHTT---BHHHHH | aaaaaavxpbxaaaaa |
1cfr_*_35 | 1cfr | - | 48 | 63 | DEAIRLGGKISDGSFN | HHHHHHT-B--HHHHH | aaaaaavbbbxaaaaa |
1dlc_*_103 | 1dlc | - | 112 | 127 | QVEALMDQKIADYAKN | HHHHHHT----HHHHH | aaaaaalbbxpaaaaa |
1dvo_A_100 | 1dvo | A | 106 | 121 | EDVAQRNIPLSHKKLR | HHHHHTT-S--HHHHH | aaaaaalxxbxaaaaa |
1ehk_A_404 | 1ehk | A | 404 | 419 | LLPNLTGKPISDAQRR | HHHHHH-----HHHHH | aaaaaagxxbxaaaaa |
1g2r_A_64 | 1g2r | A | 64 | 79 | VFNRSFSMEVEESFYD | HHHHHHTS---HHHHH | aaaaaalbxxxaaaaa |
1gak_A_8 | 1gak | A | 31 | 46 | KRFRDMRWNLGPGFVF | HHHHHHT----HHHHH | aaaaaavbpxxaaaaa |
1gux_B_700 | 1gux | B | 710 | 725 | GICKVKNIDLKFKIIV | HHHHHTT----HHHHH | aaaaaalbxbxaaaaa |
1juo_A_122 | 1juo | A | 127 | 142 | KALTTMGFRLSPQAVN | HHHHHTT----HHHHH | aaaaaagxbbxaaaaa |
1kkh_A_116 | 1kkh | A | 127 | 142 | AVSGFYNKELKDDEIA | HHHHTTT----HHHHH | aaaaaalbxxxaaaaa |
1o5z_A_259 | 1o5z | A | 269 | 284 | KTLEATGLPLSEKAIR | HHHHHH-----HHHHH | aaaaaavxwbxaaaaa |
1tn4_*_112 | 1tn4 | - | 117 | 132 | EIFRASGEHVTDEEIE | HHHHHTT----HHHHH | aaaaaavbxbxaaaaa |
1uw3_A_173 | 1uw3 | A | 189 | 204 | VTTTTKGENFTETDIK | HHHHHTT----HHHHH | aaaaaavbbbxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uw3_A_173 | 1uw3 | A | AC2PO4 BINDING SITE FOR CHAIN A | K - 204 |
1uw3_A_173 | 1uw3 | A | AC2PO4 BINDING SITE FOR CHAIN A | R - 208 |
Clusters included in this Subclass |
CLUSTER: HH.4.136 |
CLUSTER: HH.5.105 |
CLUSTER: HH.6.19 |