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Information on SUBCLASS 1.3.3
Subclass Accession number: 5297
Subclass: 1.3.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 7.2 +/- 10.0
Average RMSD (Å) : 0.507 +/- 0.138

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 0-45 rho (°): 135-180
Consensus Sequence: XXXXX
(φψ)-conformation: aapbb
Pattern: xx[afilvwy]xxxxxx
Conservation:-1.137-0.8101.248-0.918-0.169-0.0540.2381.601-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c3c_A_3041c3c   A329336NVVRNMKV.HHHHH-EE.aaaaaxxb.
1dmt_A_6081dmt   A623630YQYGNFSW.HHHHT-EE.aaaaaxbb.
1dq3_A_4041dq3   A411419HLIEGLEVVHHHHH-EEEaaaaapbbx
1eg7_A_12151eg7   A12201228ERFSRKVVGHHHHT-EEEaaaaaxxae
1fiq_C_6751fiq   C680688RAAHVVKVTHHHHT-EEEaaaaaxxbb
1gl4_A_4591gl4   A464471IGWMFAVE.HHHHT-EE.aaaaapxx.
1he1_A_1621he1   A169176GRLLERSI.HHHHT-EE.aaaaaxxb.
1hy5_A_11591hy5   A11661173SAILNTPV.HHHHHSEE.aaaaapxb.
1ic6_A_2481ic6   A251258YIADTANK.HHHHHSEE.aaaaaxxb.
1ko7_A_1141ko7   A125133LEHELARTTHHHHT-EEEaaaaaxxbb
1nc5_A_3381nc5   A339347DYYVSRERSHHHHTS-EEaaaaaxxbb
1qpb_A_1691qpb   A169177ANLVDLNVPHHHHTSEEEaaaaaxbbp
1rmd_*_781rmd   -8290NILNSLMVKHHHHH-EEEaaaaapxbx
1xva_A_1051xva   A105113PAFDKWVIEHHHHT-EEEaaaaaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmt_A_6081dmt   A     NAGN-ACETYL-D-GLUCOSAMINE V - 622
1dmt_A_6081dmt   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 623
1dmt_A_6081dmt   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 624
1dmt_A_6081dmt   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 625
1dmt_A_6081dmt   A     NAGN-ACETYL-D-GLUCOSAMINE G - 626
1dmt_A_6081dmt   A     NAGN-ACETYL-D-GLUCOSAMINE N - 627
1hy5_A_11591hy5   A     MSESELENOMETHIONINE L - 1161
1hy5_A_11591hy5   A     MSESELENOMETHIONINE Q - 1162
1hy5_A_11591hy5   A     MSESELENOMETHIONINE A - 1165
1hy5_A_11591hy5   A     MSESELENOMETHIONINE S - 1166
1hy5_A_11591hy5   A     MSESELENOMETHIONINE A - 1167
1hy5_A_11591hy5   A     MSESELENOMETHIONINE I - 1168
1hy5_A_11591hy5   A     MSESELENOMETHIONINE L - 1169
1hy5_A_11591hy5   A     MSESELENOMETHIONINE N - 1170
1ic6_A_2481ic6   A     CACALCIUM ION C - 249
1ic6_A_2481ic6   A     CACALCIUM ION N - 257
1ic6_A_2481ic6   A     CACALCIUM ION K - 258
1ko7_A_1141ko7   A     PO4PHOSPHATE ION T - 114
1ko7_A_1141ko7   A     PO4PHOSPHATE ION T - 115
1ko7_A_1141ko7   A     PO4PHOSPHATE ION H - 136

Clusters included in this Subclass
CLUSTER: HE.1.53
CLUSTER: HE.2.60
CLUSTER: HE.2.80
CLUSTER: HE.3.203