Logo
Information on SUBCLASS 2.1.8
Subclass Accession number: 5328
Subclass: 2.1.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 10.2 +/- 13.0
Average RMSD (Å) : 0.750 +/- 0.140

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXcXXh
(φψ)-conformation: aalpbb
Pattern: xxxxx[GKNQ]xx[AFGIPVY]x
Conservation:-0.447-0.514-0.621-0.518-0.4002.645-0.576-0.0740.614-0.109
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b5e_A_81b5e   A1726LALKEKDFVVHHHHTT--EEaaaaalxxbx
1cqk_A_751cqk   A7685SNWEAGNTFTHHHHTT--EEaaaaavxxbb
1fp5_A_4071fp5   A408417RDWIEGETYQHHHHTT--EEaaaaagpbbb
1j7n_A_6121j7n   A621630YLVDGNGRFVHHHHTT--EEaaaaalxbbx
1jnr_A_2741jnr   A276285WFLFFKCKAKHHHTS---EEaaaaalxbbb
1kfw_A_1491kfw   A161170DLYIKGNLPNHHHTS--EEEaaaaavxbxx
1kv7_A_1481kv7   A150159RQVAMGLAGLHHHHTT--EEaaaaagxbbb
1l6x_A_3101l6x   A311320QDWLNGKEYKHHHHTT--EEaaaaavxxbb
1l6x_A_4141l6x   A415424SRWQQGNVFSHHHHTT--EEaaaaavxxbb
1lzj_A_1021lzj   A108117QFRLQNTTIGHHHHTT-EEEaaaaalxbbx
1p1j_A_761p1j   A8695LANKHNVEFQHHHHTT--EEaaaaalxxbx
1r0w_A_4301r0w   A432441HLCLVGNPVLHHHHTT-EEEaaaaavxxab
1sc0_A_201sc0   A2029AVSHLGIEISHHHHTT--EEaaaaavxbxa
1umh_A_1951umh   A197206LLDTTQPAIVHHHHT--EEEaaaaalxpbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kfw_A_1491kfw   A     GOLGLYCEROL K - 154
1kfw_A_1491kfw   A     GOLGLYCEROL Y - 163
1lzj_A_1021lzj   A     HGMERCURY (II) ION T - 119
1lzj_A_1021lzj   A     HGMERCURY (II) ION V - 120
1lzj_A_1021lzj   A     UDPURIDINE-5'-DIPHOSPHATE V - 120
1lzj_A_1021lzj   A     HGMERCURY (II) ION F - 121
1lzj_A_1021lzj   A     UDPURIDINE-5'-DIPHOSPHATE F - 121
1lzj_A_1021lzj   A     UDPURIDINE-5'-DIPHOSPHATE A - 122
1p1j_A_761p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 76
1p1j_A_761p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 77
1p1j_A_761p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 78
1sc0_A_201sc0   A     MSESELENOMETHIONINE L - 24
1sc0_A_201sc0   A     MSESELENOMETHIONINE G - 25
1sc0_A_201sc0   A     MSESELENOMETHIONINE I - 26
1sc0_A_201sc0   A     MSESELENOMETHIONINE E - 27

Clusters included in this Subclass
CLUSTER: HE.3.44
CLUSTER: HE.4.60