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Information on SUBCLASS 2.5.9
Subclass Accession number: 5411
Subclass: 2.5.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.6 +/- 14.5
Average RMSD (Å) : 0.733 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXGXXh
(φψ)-conformation: aagpbb
Pattern: [LMP][EGT][AR][LV]x[AEK][AFI][STV][ER]xx[G][AGT][AIT][PV]x
Conservation:-0.286-0.6010.4460.792-0.601-0.129-0.444-0.2080.855-0.916-0.7583.175-0.208-0.3650.086-0.837
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gef_A_591gef   A6277MGRLIEFSRRFGGIPVHHHHHHHHHHHT-EEEaaaaaaaaaaagbxwb
1qmh_A_501qmh   A5368LTAVKAATEICGATVEHHHHHHHHHHHT-EEEaaaaaaaaaaalxbbb
1r89_A_2641r89   A264279PERLRKIVEERGTAVFHHHHHHHHHHHT-EEEaaaaaaaaaaavxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qmh_A_501qmh   A     CITCITRIC ACID Q - 51
1qmh_A_501qmh   A     CITCITRIC ACID H - 52
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qmh_A_501qmh   A RB1CITRATE BINDING SITE THAT IS INTERPRETED AS A PUTATIVE RNA BINDING SITEQ - 51

Clusters included in this Subclass
CLUSTER: HE.1.65