Information on SUBCLASS 2.6.7 |
Subclass Accession number: 5420
Subclass: 2.6.7 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 12.8 +/- 14.5 Average RMSD (Å) : 0.650 +/- 0.370 Consensus geometry
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Consensus Sequence: | ppXpXX |
(φψ)-conformation: | aabpbb |
Pattern: | x | x | x | x | x | [KNST] | [HKRY] | x | [DEN] | [LTV] | x | [HI] | x |
Conservation: | 0.011 | -0.173 | -1.745 | 0.309 | -0.326 | 0.425 | 0.508 | -0.827 | 2.108 | 0.800 | -1.411 | 0.647 | -0.326 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kkh_A_296 | 1kkh | A | 299 | 311 | LLKELNKEDVRIF | HHHHHHTSS-EEE | aaaaaaaxxbbbb |
1poi_B_138 | 1poi | B | 138 | 150 | ANGIATYSNTIIM | HHHHHHHS-EEEE | aaaaaaabxbbxx |
1sqs_A_16 | 1sqs | A | 25 | 37 | SSIISSRNNVDIS | HHHHHHHS--EEE | aaaaaaabxbbbb |
2ak3_A_18 | 2ak3 | A | 22 | 34 | SSRITKHFELKHL | HHHHHHHB--EEE | aaaaaaabxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1sqs_A_16 | 1sqs | A | TARD(-)-TARTARIC ACID | K - 16 |
1sqs_A_16 | 1sqs | A | TARD(-)-TARTARIC ACID | T - 17 |
1sqs_A_16 | 1sqs | A | TARD(-)-TARTARIC ACID | L - 18 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | R - 23 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | L - 24 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | I - 27 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | R - 31 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | N - 33 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | V - 34 |
1sqs_A_16 | 1sqs | A | MSESELENOMETHIONINE | D - 35 |
2ak3_A_18 | 2ak3 | A | AMPADENOSINE MONOPHOSPHATE | K - 18 |
2ak3_A_18 | 2ak3 | A | AMPADENOSINE MONOPHOSPHATE | S - 35 |
Clusters included in this Subclass |
CLUSTER: HE.3.273 |
CLUSTER: HE.4.212 |