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Information on SUBCLASS 2.6.7
Subclass Accession number: 5420
Subclass: 2.6.7 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.8 +/- 14.5
Average RMSD (Å) : 0.650 +/- 0.370

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: ppXpXX
(φψ)-conformation: aabpbb
Pattern: xxxxx[KNST][HKRY]x[DEN][LTV]x[HI]x
Conservation:0.011-0.173-1.7450.309-0.3260.4250.508-0.8272.1080.800-1.4110.647-0.326
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kkh_A_2961kkh   A299311LLKELNKEDVRIFHHHHHHTSS-EEEaaaaaaaxxbbbb
1poi_B_1381poi   B138150ANGIATYSNTIIMHHHHHHHS-EEEEaaaaaaabxbbxx
1sqs_A_161sqs   A2537SSIISSRNNVDISHHHHHHHS--EEEaaaaaaabxbbbb
2ak3_A_182ak3   A2234SSRITKHFELKHLHHHHHHHB--EEEaaaaaaabxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1sqs_A_161sqs   A     TARD(-)-TARTARIC ACID K - 16
1sqs_A_161sqs   A     TARD(-)-TARTARIC ACID T - 17
1sqs_A_161sqs   A     TARD(-)-TARTARIC ACID L - 18
1sqs_A_161sqs   A     MSESELENOMETHIONINE R - 23
1sqs_A_161sqs   A     MSESELENOMETHIONINE L - 24
1sqs_A_161sqs   A     MSESELENOMETHIONINE I - 27
1sqs_A_161sqs   A     MSESELENOMETHIONINE R - 31
1sqs_A_161sqs   A     MSESELENOMETHIONINE N - 33
1sqs_A_161sqs   A     MSESELENOMETHIONINE V - 34
1sqs_A_161sqs   A     MSESELENOMETHIONINE D - 35
2ak3_A_182ak3   A     AMPADENOSINE MONOPHOSPHATE K - 18
2ak3_A_182ak3   A     AMPADENOSINE MONOPHOSPHATE S - 35

Clusters included in this Subclass
CLUSTER: HE.3.273
CLUSTER: HE.4.212