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Information on SUBCLASS 4.3.2
Subclass Accession number: 5605
Subclass: 4.3.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 22.9 +/- 19.9
Average RMSD (Å) : 0.950 +/- 0.334

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XphpXPhh
(φψ)-conformation: aapabpbb
Pattern: [afilptv][ADEKN]x[ILVY][agkns][ADGKNRS][AILVY][dkpst]x[P][AFIMTV][ILV][ailv][ailvy]
Conservation:-0.8450.024-0.9180.384-0.500-0.3320.017-0.451-0.5693.104-0.3970.749-0.038-0.230
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a88_A_2081a88   A208221TDDLKRIDVPVLVAHHHHHH--S-EEEEaaaaaaxaxwbxbb
1a8s_*_2061a8s   -206219TEDLKKIDVPTLVVHHHHHT--S-EEEEaaaaaaxabpbxbb
1bfd_*_1871bfd   -194207VKALNSASNPAIVLHHHHHH-SS-EEEEaaaaaaxabxbbbb
1f5n_A_251f5n   A2841LKILSAITQPMVVVHHHHHT--SBEEEEaaaaaaxaxpbbbb
1gqo_A_821gqo   A8598RDAVSSISLPVVEVHHHHHTS-S-EEEEaaaaaabaxwbbxb
1gz0_A_851gz0   A8699PDLIASLDQPFLLIHHHHHT-SS-EEEEaaaaaababpbbbb
1hzd_A_1511hzd   A165178INDIANLPVPTIAAHHHHHT-SS-EEEEaaaaaapabpbbxb
1imj_A_1441imj   A144157AANYASVKTPALIVHHHHHT--S-EEEEaaaaaaxaxwbbxb
1ju3_A_2411ju3   A241254FERLGGLATPALITHHHHTT----EEEEaaaaaaxabwbxxb
1uyr_A_19671uyr   A19751988VDALVDYKQPIIIYHHHHHT--S-EEEEaaaaaaxabpbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f5n_A_251f5n   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER G - 45
1gqo_A_821gqo   A     GOLGLYCEROL Y - 82
1gqo_A_821gqo   A     GOLGLYCEROL R - 85
1gqo_A_821gqo   A     GOLGLYCEROL D - 86
1gqo_A_821gqo   A     GOLGLYCEROL S - 90
1gqo_A_821gqo   A     GOLGLYCEROL H - 99
1gz0_A_851gz0   A     MSESELENOMETHIONINE L - 85
1gz0_A_851gz0   A     MSESELENOMETHIONINE P - 86
1gz0_A_851gz0   A     MSESELENOMETHIONINE I - 89
1gz0_A_851gz0   A     MSESELENOMETHIONINE F - 96
1gz0_A_851gz0   A     MSESELENOMETHIONINE L - 98
1gz0_A_851gz0   A     MSESELENOMETHIONINE I - 99
1uyr_A_19671uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID V - 1967
1uyr_A_19671uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID L - 1968
1uyr_A_19671uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID Y - 1970
1uyr_A_19671uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID G - 1971
1uyr_A_19671uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID S - 1972
1uyr_A_19671uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID I - 1974

Clusters included in this Subclass
CLUSTER: HE.4.163
CLUSTER: HE.5.140
CLUSTER: HE.6.147