Information on SUBCLASS 4.11.1 |
Subclass Accession number: 6291
Subclass: 4.11.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 18.6 +/- 17.5 Average RMSD (Å) : 0.800 +/- 0.365 Consensus geometry
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Consensus Sequence: | XhpXpGXX |
(φψ)-conformation: | bbpaalbb |
Pattern: | [aegnt] | [AFIVY] | [DET] | [gknt] | [dhs] | [GL] | x | [aglptv] | x | [gltv] |
Conservation: | -0.693 | 0.186 | 1.737 | -0.452 | 0.253 | 1.705 | -0.164 | -0.864 | -1.026 | -0.682 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fid_*_178 | 1fid | - | 183 | 192 | EIDGSGNGWT | EE-TTS-EEE | bbbaavxbxx |
1h64_1_25 | 1h64 | 1 | 33 | 42 | GYDIHLNVVL | EE-TT--EEE | bbbaavxbbb |
1kb0_A_361 | 1kb0 | A | 363 | 372 | GYDKHGKPIG | EE-TTS-EEE | ebxaavbxxx |
1ozu_A_83 | 1ozu | A | 88 | 97 | TADKDGVADV | EE-TTS-EEE | bxxaavbbxb |
1qmh_A_326 | 1qmh | A | 327 | 336 | LIETDGVTRV | EEE-SS-EEE | bbxaavbbxb |
2ayh_*_39 | 2ayh | - | 40 | 49 | NFTNDGKLKL | EE-TTS-EEE | bbxaavbxbx |
3pvi_A_59 | 3pvi | A | 59 | 68 | AVDNAGQEYE | EE-TT--EEE | bbxaavxxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ozu_A_83 | 1ozu | A | ZNZINC ION | D - 83 |
2ayh_*_39 | 2ayh | * | CACALCIUM ION | D - 44 |
2ayh_*_39 | 2ayh | * | CACALCIUM ION | G - 45 |
2ayh_*_39 | 2ayh | * | CACALCIUM ION | K - 46 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
3pvi_A_59 | 3pvi | A | CA1CATALYTIC RESIDUES-FIRST MONOMER | E - 68 |
3pvi_A_59 | 3pvi | A | CA1CATALYTIC RESIDUES-FIRST MONOMER | K - 70 |
Clusters included in this Subclass |
CLUSTER: HA.5.120 |
CLUSTER: HA.6.111 |