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Information on SUBCLASS 5.7.1
Subclass Accession number: 6381
Subclass: 5.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 9.9 +/- 14.1
Average RMSD (Å) : 0.357 +/- 0.093

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXXXXXXX
(φψ)-conformation: bbaaallpb
Pattern: xx[agilptv]xx[adgkn]xxx
Conservation:-1.102-0.541-0.552-1.0980.5801.6440.4581.185-0.574
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1afr_A_3501afr   A352360PFSWIFDRQEEGGGTTEExbaaalvxb
1auo_A_531auo   A5563PVTINGGYEEEGGGTTEEwbaaavvpx
1bw0_A_1511bw0   A157165CRPENDWEAEEGGGTTEEbxaaavvxx
1dmt_A_6291dmt   A629637SWDLAGGQHEEGGGTTEEbbaaavvxx
1e0c_A_1991e0c   A199207MDPSRALRIEEGGGTTEExbaaalvxx
1e9i_A_2561e9i   A258266VLAGEGNKAEEGGGTSEExxaaavvxb
1ep3_A_1361ep3   A136144PNVKHGGQAEEGGGTTEExxaaavgxx
1fj2_A_531fj2   A5563PVTLNMNVAEEGGGTTEEpbaaalvxx
1g8k_B_841g8k   B8593FDAEKAGQMEEGGGTTEEbxaaalvpx
1jm1_A_1761jm1   A177185YALKDGGVVEEGGGTSEEbxaaavvxx
1k0d_A_1671k0d   A169177IDHGMDNLSEEGGGTTEEbxaaalvxb
1k0d_D_1671k0d   D169177IDHGMDNLSEEGGGTSEEbxaaallxb
1k8k_C_2251k8k   C229237ADADKKMAVEEGGGTTEEbbaaalvxb
1kl9_A_311kl9   A3442SLLEYNNIEEETTTTTEEbxaaalvxx
1nr0_A_5151nr0   A518526YSVANNFELEEGGGTTEEbxaaallxp
1nyk_A_1571nyk   A158166YDLRHGAQVEEGGGTTEEbxaaavlpx
1oyw_A_4821oyw   A484492QNIAQHSALEEGGGTTEEbxaaalvpx
1pmi_*_591pmi   -6068KAIDLNNQTEETTTTTEEbxaaavvxx
1tn3_*_1521tn3   -155163LSGAANGKWEETTTTTEEbbaaavvxx
1ulz_A_3411ulz   A341349EDPKKNFAPEEGGGTTEEbbaaallxx
1v8k_A_2221v8k   A224232FDLLNKKAKEETTTTTEEbxaaalUpx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmt_A_6291dmt   A     NAGN-ACETYL-D-GLUCOSAMINE H - 637
1g8k_B_841g8k   B     OC6CALCIUM ION, 6 WATERS COORDINATED E - 84
1g8k_B_841g8k   B     FESFE2/S2 (INORGANIC) CLUSTER F - 85
1g8k_B_841g8k   B     HGMERCURY (II) ION C - 95
1jm1_A_1761jm1   A     MGMAGNESIUM ION I - 176
1jm1_A_1761jm1   A     FESFE2/S2 (INORGANIC) CLUSTER Y - 177
1jm1_A_1761jm1   A     MGMAGNESIUM ION A - 178
1jm1_A_1761jm1   A     MGMAGNESIUM ION K - 180
1jm1_A_1761jm1   A     MGMAGNESIUM ION V - 186
1k0d_A_1671k0d   A     GTTGLUTATHIONE W - 179
1kl9_A_311kl9   A     MSESELENOMETHIONINE A - 31
1kl9_A_311kl9   A     MSESELENOMETHIONINE Y - 32
1kl9_A_311kl9   A     MSESELENOMETHIONINE V - 33
1kl9_A_311kl9   A     MSESELENOMETHIONINE S - 34
1kl9_A_311kl9   A     MSESELENOMETHIONINE L - 35
1kl9_A_311kl9   A     MSESELENOMETHIONINE L - 36
1kl9_A_311kl9   A     MSESELENOMETHIONINE E - 37
1kl9_A_311kl9   A     MSESELENOMETHIONINE E - 42
1nyk_A_1571nyk   A     FESFE2/S2 (INORGANIC) CLUSTER Y - 158
1nyk_A_1571nyk   A     MGMAGNESIUM ION R - 161
1nyk_A_1571nyk   A     MGMAGNESIUM ION H - 162
1oyw_A_4821oyw   A     MSESELENOMETHIONINE Q - 484
1oyw_A_4821oyw   A     MSESELENOMETHIONINE S - 490
1oyw_A_4821oyw   A     MSESELENOMETHIONINE L - 492
1tn3_*_1521tn3   *     CACALCIUM ION C - 152
1tn3_*_1521tn3   *     CACALCIUM ION F - 164
1tn3_*_1521tn3   *     CACALCIUM ION D - 165
1tn3_*_1521tn3   *     CACALCIUM ION K - 166
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1tn3_*_1521tn3   * CA2CALCIUM BINDING SITE 2.D - 165

Clusters included in this Subclass
CLUSTER: HA.4.33