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Information on SUBCLASS 6.3.1
Subclass Accession number: 6432
Subclass: 6.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 11.8 +/- 13.7
Average RMSD (Å) : 0.652 +/- 0.226

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXpXXpXXXX
(φψ)-conformation: bbpaabaabb
Pattern: xxx[CDHNQST][aeknqrst]x[dhnrsy][deknpqr][dgknqrs]x[acfgiklmtv]xx
Conservation:-0.870-0.457-0.4001.8450.445-0.5221.0811.881-0.015-0.570-0.701-0.826-0.891
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c2a_A_981c2a   A98110CLPSRSRPSRRVCEEE-SS-TTSEEEbbxxaabaabbbx
1em2_A_3901em2   A390402VLKSASNPRVCTFEEE-SS-TT-EEEbbxxaabaabbbb
1ext_A_191ext   A1931KYIHPQNNSICCTEEE-SS-TT-EEEbbxpaabaabbbx
1f3l_A_4951f3l   A502514VHKNKKDPRSLIVEEE-TTSTTSEEEbbxpaabaabbbb
1gyv_A_7151gyv   A721733FERSNTNPSVTVIEEE-SS-TTEEEEbbxxaabaabbxb
1hsk_A_2651hsk   A265277VEVSTKHAGFMVNEEE-SS-TT-EEEbbxpaabaabbxx
1i0a_A_2791i0a   A279289.TGSSLLPQKKN..EE-SS-TT-EE..bbbaabaaxbx.
1id2_A_871id2   A90102DYFCTPHPFMRGKEEE-SS-TT-EEExbbbaabaaxbbb
1itk_A_3541itk   A354364.VPDAHDPDEKQ..EE-SS-TT-EE..bxxaaxaabbb.
1lj9_A_741lj9   A7688RQEDASNKKIKRIEEE-SS-TT-EEEbbxxaabaaxbxx
1lp9_E_1241lp9   E127139QLKDPRSQDSTLCEEE-TTSSS-EEEbbbbaabaaxbbb
1mj8_H_881mj8   H93105ARKHYFYDGVVYWEEE-SS-TT-EEEbbxxaaxaabbxb
1mwv_A_3711mwv   A371381.IPDAFDPSKKH..EE-SS-TT-EE..xxxaabaabbb.
1mwv_A_6731mwv   A675687WKPTAADADVFEGEEE-SS-TTEEEEbbxxaabaabbbb
1n7v_A_2841n7v   A285297LVRQTSNPMNAVAEEE-SS-TTSEEEbbbpaabaaxbbb
1nrv_A_4581nrv   A461473LRDSQSNPKAFVLEEE-SS-TT-EEEbbxxaabaabbbb
1p35_A_2391p35   A249261TTESSWGKSEKYNEE--SSSSS--EEbbxxaabaaxpxb
1p4x_A_2051p4x   A206218KERSTEDERKILIEEE-SSSTT-EEEbbbxaabaaxbxb
1p4x_A_811p4x   A8294KVRSKIDERNTYIEEE-SSSTTSEEEbbxxaaxaaxbbb
1q0b_A_1831q0b   A184196MFDDPRNKRGVIIEEE-SS-TT-EEEbbxxaabaabbbb
1q2b_A_1931q2b   A193203.EPSSNNANTGI..EE-SS-TT-EE..bpxaabaabbb.
1rdr_*_3771rdr   -378390FRADEKYPFLIHPEEE-SS-TTSEEEbbxxaabaabxxw
1rpy_A_4341rpy   A436448IRQSETRPGECVLEEE-SSSTT-EEEbbxxaabaabbbb
1s3j_A_811s3j   A8395RTHNTKDRRVIDLEEE-SS-TTSEEEbbxxaabaaxbxb
2abl_*_1682abl   -170182VRESESSPGQRSIEEE-SS-TT-EEEbbbxaaxaaxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1em2_A_3901em2   A     MSESELENOMETHIONINE V - 390
1em2_A_3901em2   A     TARD(-)-TARTARIC ACID S - 393
1em2_A_3901em2   A     TARD(-)-TARTARIC ACID S - 395
1em2_A_3901em2   A     TARD(-)-TARTARIC ACID N - 396
1em2_A_3901em2   A     TARD(-)-TARTARIC ACID V - 399
1em2_A_3901em2   A     MSESELENOMETHIONINE F - 402
1em2_A_3901em2   A     MSESELENOMETHIONINE V - 403
1em2_A_3901em2   A     MSESELENOMETHIONINE W - 404
1em2_A_3901em2   A     MSESELENOMETHIONINE I - 405
1em2_A_3901em2   A     MSESELENOMETHIONINE L - 406
1f3l_A_4951f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE R - 510
1hsk_A_2651hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 274
1id2_A_871id2   A     CUCOPPER (II) ION C - 93
1id2_A_871id2   A     CUCOPPER (II) ION T - 94
1id2_A_871id2   A     CUCOPPER (II) ION P - 95
1id2_A_871id2   A     CUCOPPER (II) ION H - 96
1id2_A_871id2   A     CUCOPPER (II) ION M - 99
1mj8_H_881mj8   H     PO4PHOSPHATE ION A - 93
1mj8_H_881mj8   H     GOLGLYCEROL A - 93
1mj8_H_881mj8   H     PO4PHOSPHATE ION R - 94
1mj8_H_881mj8   H     GOLGLYCEROL R - 94
1mj8_H_881mj8   H     PO4PHOSPHATE ION K - 95
1mj8_H_881mj8   H     GOLGLYCEROL K - 95
1rpy_A_4341rpy   A     MSESELENOMETHIONINE F - 434
1s3j_A_811s3j   A     MSESELENOMETHIONINE I - 81

Clusters included in this Subclass
CLUSTER: HA.7.6
CLUSTER: HA.8.2