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PDB code:

Information on SUBCLASS 6.3.1

Subclass Accession number: 6432 Subclass: 6.3.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 25 Average sequence ID (%) : 11.8 +/- 13.7 Average RMSD (Å) : 0.652 +/- 0.226 Consensus geometry d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c2a_A_98	1c2a	A	98	110	CLPSRSRPSRRVC	EEE-SS-TTSEEE	bbxxaabaabbbx
1em2_A_390	1em2	A	390	402	VLKSASNPRVCTF	EEE-SS-TT-EEE	bbxxaabaabbbb
1ext_A_19	1ext	A	19	31	KYIHPQNNSICCT	EEE-SS-TT-EEE	bbxpaabaabbbx
1f3l_A_495	1f3l	A	502	514	VHKNKKDPRSLIV	EEE-TTSTTSEEE	bbxpaabaabbbb
1gyv_A_715	1gyv	A	721	733	FERSNTNPSVTVI	EEE-SS-TTEEEE	bbxxaabaabbxb
1hsk_A_265	1hsk	A	265	277	VEVSTKHAGFMVN	EEE-SS-TT-EEE	bbxpaabaabbxx
1i0a_A_279	1i0a	A	279	289	.TGSSLLPQKKN.	.EE-SS-TT-EE.	.bbbaabaaxbx.
1id2_A_87	1id2	A	90	102	DYFCTPHPFMRGK	EEE-SS-TT-EEE	xbbbaabaaxbbb
1itk_A_354	1itk	A	354	364	.VPDAHDPDEKQ.	.EE-SS-TT-EE.	.bxxaaxaabbb.
1lj9_A_74	1lj9	A	76	88	RQEDASNKKIKRI	EEE-SS-TT-EEE	bbxxaabaaxbxx
1lp9_E_124	1lp9	E	127	139	QLKDPRSQDSTLC	EEE-TTSSS-EEE	bbbbaabaaxbbb
1mj8_H_88	1mj8	H	93	105	ARKHYFYDGVVYW	EEE-SS-TT-EEE	bbxxaaxaabbxb
1mwv_A_371	1mwv	A	371	381	.IPDAFDPSKKH.	.EE-SS-TT-EE.	.xxxaabaabbb.
1mwv_A_673	1mwv	A	675	687	WKPTAADADVFEG	EEE-SS-TTEEEE	bbxxaabaabbbb
1n7v_A_284	1n7v	A	285	297	LVRQTSNPMNAVA	EEE-SS-TTSEEE	bbbpaabaaxbbb
1nrv_A_458	1nrv	A	461	473	LRDSQSNPKAFVL	EEE-SS-TT-EEE	bbxxaabaabbbb
1p35_A_239	1p35	A	249	261	TTESSWGKSEKYN	EE--SSSSS--EE	bbxxaabaaxpxb
1p4x_A_205	1p4x	A	206	218	KERSTEDERKILI	EEE-SSSTT-EEE	bbbxaabaaxbxb
1p4x_A_81	1p4x	A	82	94	KVRSKIDERNTYI	EEE-SSSTTSEEE	bbxxaaxaaxbbb
1q0b_A_183	1q0b	A	184	196	MFDDPRNKRGVII	EEE-SS-TT-EEE	bbxxaabaabbbb
1q2b_A_193	1q2b	A	193	203	.EPSSNNANTGI.	.EE-SS-TT-EE.	.bpxaabaabbb.
1rdr_*_377	1rdr	-	378	390	FRADEKYPFLIHP	EEE-SS-TTSEEE	bbxxaabaabxxw
1rpy_A_434	1rpy	A	436	448	IRQSETRPGECVL	EEE-SSSTT-EEE	bbxxaabaabbbb
1s3j_A_81	1s3j	A	83	95	RTHNTKDRRVIDL	EEE-SS-TTSEEE	bbxxaabaaxbxb
2abl_*_168	2abl	-	170	182	VRESESSPGQRSI	EEE-SS-TT-EEE	bbbxaaxaaxbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1em2_A_390	1em2	A	MSESELENOMETHIONINE	V - 390
1em2_A_390	1em2	A	TARD(-)-TARTARIC ACID	S - 393
1em2_A_390	1em2	A	TARD(-)-TARTARIC ACID	S - 395
1em2_A_390	1em2	A	TARD(-)-TARTARIC ACID	N - 396
1em2_A_390	1em2	A	TARD(-)-TARTARIC ACID	V - 399
1em2_A_390	1em2	A	MSESELENOMETHIONINE	F - 402
1em2_A_390	1em2	A	MSESELENOMETHIONINE	V - 403
1em2_A_390	1em2	A	MSESELENOMETHIONINE	W - 404
1em2_A_390	1em2	A	MSESELENOMETHIONINE	I - 405
1em2_A_390	1em2	A	MSESELENOMETHIONINE	L - 406
1f3l_A_495	1f3l	A	SAHS-ADENOSYL-L-HOMOCYSTEINE	R - 510
1hsk_A_265	1hsk	A	FADFLAVIN-ADENINE DINUCLEOTIDE	F - 274
1id2_A_87	1id2	A	CUCOPPER (II) ION	C - 93
1id2_A_87	1id2	A	CUCOPPER (II) ION	T - 94
1id2_A_87	1id2	A	CUCOPPER (II) ION	P - 95
1id2_A_87	1id2	A	CUCOPPER (II) ION	H - 96
1id2_A_87	1id2	A	CUCOPPER (II) ION	M - 99
1mj8_H_88	1mj8	H	PO4PHOSPHATE ION	A - 93
1mj8_H_88	1mj8	H	GOLGLYCEROL	A - 93
1mj8_H_88	1mj8	H	PO4PHOSPHATE ION	R - 94
1mj8_H_88	1mj8	H	GOLGLYCEROL	R - 94
1mj8_H_88	1mj8	H	PO4PHOSPHATE ION	K - 95
1mj8_H_88	1mj8	H	GOLGLYCEROL	K - 95
1rpy_A_434	1rpy	A	MSESELENOMETHIONINE	F - 434
1s3j_A_81	1s3j	A	MSESELENOMETHIONINE	I - 81

Clusters included in this Subclass

CLUSTER: HA.7.6

CLUSTER: HA.8.2

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