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Information on SUBCLASS 4.6.1
Subclass Accession number: 657
Subclass: 4.6.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 16.7 +/- 16.8
Average RMSD (Å) : 0.371 +/- 0.184

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhXXGXXX
(φψ)-conformation: bbllgabb
Pattern: x[acfgilmtv]x[adegknrs][gr]xx[acfgiklmtv]
Conservation:-0.490-0.376-0.3180.0132.440-0.334-0.544-0.391
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b9w_A_811b9w   A8188PLFEGVFCEEGGGTEEwblvgabb
1bif_*_2141bif   -217224IMDVGQSYEETTTTEEbblvvabb
1e0t_A_1221e0t   A124131LVDDGLIGEETTTTEEbxllvabb
1e44_B_421e44   B4451TGDKGRKIEETTTTEEbbllvabb
1efv_A_1431efv   A147154TIYAGNALEETTTTEEbbllvabb
1fp3_A_2181fp3   A218225VQRDGQAVEETTTTEExbllvabb
1g3k_A_341g3k   A3643RLYNGKVLEETTTTEEbbllvabb
1h0b_A_111h0b   A1320DVAGGRYREEGGGTEExblvvabb
1hbn_B_1021hbn   B105112LLGGGKRAEEGGGTEExbvvvabb
1hz6_A_471hz6   A5158VADKGYTLEEGGGTEExbllvabb
1ijv_A_231ijv   A2633TCYRGKAKEETTTTEEbbvlvabx
1j8b_A_321j8b   A3643ESGAGLVKEEGGGTEEbbvlvabb
1jhs_A_341jhs   A3744ELYGGAITEEGGGTEEbblvgabb
1jk7_A_2551jk7   A257264FFAKRQLVEETTTTEExbllvabb
1jmx_B_561jmx   B6067LNNHYGDIEETTTTEExblvlabb
1jvn_A_4331jvn   A439446TIKGGRESEETTTTEEbblvvabx
1k32_A_1611k32   A165172VENDGINFEEGGGTEExbllvabb
1kz7_A_9121kz7   A916923WYNAREEVEETTTTEEbbllvabb
1l6r_A_621l6r   A6370FGENGGIMEEGGGTEEbbllgabb
1md6_A_551md6   A5966GVQGGSQCEETTTTEEbblvvabb
1nrw_A_601nrw   A6269ISANGAVIEEGGGTEEbblvvabb
1pkl_A_1401pkl   A142149YIDDGILIEETTTTEExbvvvaxb
1q16_A_131q16   A1623TFADGHGQEETTTTEExbllvabb
1rkq_A_661rkq   A6875ITYNGALVEEGGGTEEbblvgabb
1rwz_A_2211rwz   A226233ELVGGRAKEETTTTEEbblvvabb
1thf_D_1371thf   D141148FTYSGKKNEETTTTEEbbllvabx
1umz_A_241umz   A2633YFNGGNEIEEGGGTEEbblvvabb
2prg_A_3382prg   A340347LISEGQGFEETTTTEExbllvabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER I - 217
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER M - 218
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER D - 219
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER V - 220
1bif_*_2141bif   *     ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER G - 221
1e44_B_421e44   B     EDO1,2-ETHANEDIOL R - 42
1e44_B_421e44   B     EDO1,2-ETHANEDIOL W - 43
1hbn_B_1021hbn   B     MGMAGNESIUM ION E - 104
1kz7_A_9121kz7   A     MSESELENOMETHIONINE Y - 917
1kz7_A_9121kz7   A     MSESELENOMETHIONINE Y - 924
1nrw_A_601nrw   A     MSESELENOMETHIONINE V - 61
1thf_D_1371thf   D     PO4PHOSPHATE ION T - 142
1thf_D_1371thf   D     PO4PHOSPHATE ION Y - 143
1thf_D_1371thf   D     PO4PHOSPHATE ION S - 144
2prg_A_3382prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) V - 339
2prg_A_3382prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) L - 340
2prg_A_3382prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) I - 341
2prg_A_3382prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) S - 342
2prg_A_3382prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) M - 348

Clusters included in this Subclass
CLUSTER: HA.3.21