Information on SUBCLASS 3.9.1 |
Subclass Accession number: 6725
Subclass: 3.9.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 9.1 +/- 14.6 Average RMSD (Å) : 0.827 +/- 0.171 Consensus geometry
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Consensus Sequence: | XhXhXph |
(φψ)-conformation: | bbppabb |
Pattern: | [fiklmtv] | x | x | [agnpst] | [dekprs] | [enqrty] | [AFILMPV] | x | x |
Conservation: | 0.104 | -1.744 | -0.983 | 0.738 | 0.367 | 0.486 | 1.032 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c96_A_61 | 1c96 | A | 63 | 71 | RLRPDRVAM | EE--SEEEE | xbbpabbbb |
1cb0_A_107 | 1cb0 | A | 107 | 115 | IVIIDQFID | EE---EEEE | bbxpabbbx |
1dii_A_239 | 1dii | A | 239 | 247 | MPKPPVFKP | EE--SEEEE | xxxxabbbw |
1efy_A_947 | 1efy | A | 949 | 956 | KGLGKTAP. | EE--SEEE. | bxxbabbp. |
1gs0_A_490 | 1gs0 | A | 492 | 498 | KGMGKMA.. | EE--SEE.. | bxxxabb.. |
1lk5_A_80 | 1lk5 | A | 84 | 90 | VDGADEV.. | EE--SEE.. | bbxbabb.. |
1lvl_*_254 | 1lvl | - | 254 | 262 | RLEADRVLV | EE--S-EEE | bbxbabbbx |
1o9l_A_396 | 1o9l | A | 398 | 404 | MLGAMQV.. | EE--SEE.. | bbxbabb.. |
1omz_A_262 | 1omz | A | 264 | 272 | FVKPINMVN | EE--SSEEE | xbxxabbbx |
1pb1_A_20 | 1pb1 | A | 21 | 29 | LNVPENPII | EE--SSBEE | xbbxabxxb |
1qdl_A_110 | 1qdl | A | 112 | 120 | FFTPDNIII | EE--SEEEE | bbbpabbbb |
1ryp_2_128 | 1ryp | 2 | 128 | 135 | TYSSPTLA. | EE--SEEE. | bbbbabbb. |
2cnd_*_132 | 2cnd | - | 133 | 141 | QRNARRLAM | EE--SEEEE | bbbbabbbb |
2pva_A_47 | 2pva | A | 47 | 55 | VINNSYAFV | EE--SS-EE | bbxxabxbb |
3lad_A_138 | 3lad | A | 140 | 148 | VLDTENVIL | EE--S-EEE | bbbbabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c96_A_61 | 1c96 | A | FLCCITRATE ANION | Q - 72 |
1c96_A_61 | 1c96 | A | FS4IRON/SULFUR CLUSTER | Q - 72 |
1c96_A_61 | 1c96 | A | OXBOUND OXYGEN | Q - 72 |
1omz_A_262 | 1omz | A | EDO1,2-ETHANEDIOL | G - 262 |
1omz_A_262 | 1omz | A | EDO1,2-ETHANEDIOL | I - 263 |
1omz_A_262 | 1omz | A | MNMANGANESE (II) ION | N - 272 |
1omz_A_262 | 1omz | A | UD2URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE | N - 272 |
1pb1_A_20 | 1pb1 | A | GOLGLYCEROL | K - 20 |
1pb1_A_20 | 1pb1 | A | GOLGLYCEROL | L - 21 |
Clusters included in this Subclass |
CLUSTER: AR.2.56 |
CLUSTER: AR.3.122 |
CLUSTER: AR.4.130 |
CLUSTER: AR.4.17 |
CLUSTER: AR.5.38 |