Information on SUBCLASS 3.5.2 |
Subclass Accession number: 7266
Subclass: 3.5.2 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 8.6 +/- 16.0 Average RMSD (Å) : 0.975 +/- 0.191 Consensus geometry
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Consensus Sequence: | XhXXppX |
(φψ)-conformation: | bbppbaa |
Pattern: | x | x | [AFILPV] | x | x | [DHNST] | [ADEN] | [adkrt] | x | [ailw] |
Conservation: | -0.037 | -0.810 | 0.056 | -0.582 | -0.680 | 1.318 | 2.232 | -0.544 | -0.290 | -0.662 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1deu_A_151 | 1deu | A | 153 | 162 | CGIMATERLA | EEE---HHHH | bxbxxbaaaa |
1gmy_A_151 | 1gmy | A | 151 | 160 | YSVSNSEKDI | EE--S-HHHH | bxbxxbaaaa |
1jqp_A_345 | 1jqp | A | 347 | 356 | VAFEVHDDFL | EEE---HHHH | bbbxxbaaaa |
1lc5_A_335 | 1lc5 | A | 337 | 346 | RVAIRSAAQN | EEE---HHHH | bbxbbxaaaa |
1me3_A_109 | 1me3 | A | 111 | 120 | VELPQDEAQI | EE--S-HHHH | bbxxxbaaaa |
1p3y_1_119 | 1p3y | 1 | 120 | 129 | FFPNMNDLMW | EEE---HHHH | bbpbbxaaaa |
1rkd_*_183 | 1rkd | - | 183 | 191 | .IITPNETEA | .EE---HHHH | .bbbxxaaaa |
8pch_A_130 | 8pch | A | 132 | 141 | FAFEVTNDFL | EEE---HHHH | bbbxxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lc5_A_335 | 1lc5 | A | PIHYDROGENPHOSPHATE ION | R - 337 |
1p3y_1_119 | 1p3y | 1 | FADFLAVIN-ADENINE DINUCLEOTIDE | N - 123 |
1p3y_1_119 | 1p3y | 1 | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 124 |
1p3y_1_119 | 1p3y | 1 | FADFLAVIN-ADENINE DINUCLEOTIDE | N - 125 |
1p3y_1_119 | 1p3y | 1 | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 128 |
1rkd_*_183 | 1rkd | * | ADPADENOSINE-5'-DIPHOSPHATE | N - 187 |
1rkd_*_183 | 1rkd | * | PO4PHOSPHATE ION | N - 187 |
1rkd_*_183 | 1rkd | * | ADPADENOSINE-5'-DIPHOSPHATE | E - 188 |
1rkd_*_183 | 1rkd | * | PO4PHOSPHATE ION | T - 189 |
1rkd_*_183 | 1rkd | * | ADPADENOSINE-5'-DIPHOSPHATE | E - 190 |
1rkd_*_183 | 1rkd | * | PO4PHOSPHATE ION | E - 190 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1rkd_*_183 | 1rkd | * | AB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH ADP. | N - 187 |
1rkd_*_183 | 1rkd | * | AB2RESIDUES MAKING WATER-MEDIATED HYDROGEN BONDS WITH ADP. | E - 190 |
Clusters included in this Subclass |
CLUSTER: EH.4.48 |