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Information on SUBCLASS 3.5.2
Subclass Accession number: 7266
Subclass: 3.5.2 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 8.6 +/- 16.0
Average RMSD (Å) : 0.975 +/- 0.191

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhXXppX
(φψ)-conformation: bbppbaa
Pattern: xx[AFILPV]xx[DHNST][ADEN][adkrt]x[ailw]
Conservation:-0.037-0.8100.056-0.582-0.6801.3182.232-0.544-0.290-0.662
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1deu_A_1511deu   A153162CGIMATERLAEEE---HHHHbxbxxbaaaa
1gmy_A_1511gmy   A151160YSVSNSEKDIEE--S-HHHHbxbxxbaaaa
1jqp_A_3451jqp   A347356VAFEVHDDFLEEE---HHHHbbbxxbaaaa
1lc5_A_3351lc5   A337346RVAIRSAAQNEEE---HHHHbbxbbxaaaa
1me3_A_1091me3   A111120VELPQDEAQIEE--S-HHHHbbxxxbaaaa
1p3y_1_1191p3y   1120129FFPNMNDLMWEEE---HHHHbbpbbxaaaa
1rkd_*_1831rkd   -183191.IITPNETEA.EE---HHHH.bbbxxaaaa
8pch_A_1308pch   A132141FAFEVTNDFLEEE---HHHHbbbxxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lc5_A_3351lc5   A     PIHYDROGENPHOSPHATE ION R - 337
1p3y_1_1191p3y   1     FADFLAVIN-ADENINE DINUCLEOTIDE N - 123
1p3y_1_1191p3y   1     FADFLAVIN-ADENINE DINUCLEOTIDE M - 124
1p3y_1_1191p3y   1     FADFLAVIN-ADENINE DINUCLEOTIDE N - 125
1p3y_1_1191p3y   1     FADFLAVIN-ADENINE DINUCLEOTIDE M - 128
1rkd_*_1831rkd   *     ADPADENOSINE-5'-DIPHOSPHATE N - 187
1rkd_*_1831rkd   *     PO4PHOSPHATE ION N - 187
1rkd_*_1831rkd   *     ADPADENOSINE-5'-DIPHOSPHATE E - 188
1rkd_*_1831rkd   *     PO4PHOSPHATE ION T - 189
1rkd_*_1831rkd   *     ADPADENOSINE-5'-DIPHOSPHATE E - 190
1rkd_*_1831rkd   *     PO4PHOSPHATE ION E - 190
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1rkd_*_1831rkd   * AB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH ADP.N - 187
1rkd_*_1831rkd   * AB2RESIDUES MAKING WATER-MEDIATED HYDROGEN BONDS WITH ADP.E - 190

Clusters included in this Subclass
CLUSTER: EH.4.48