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Information on SUBCLASS 5.11.1
Subclass Accession number: 733
Subclass: 5.11.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 7.1 +/- 9.3
Average RMSD (Å) : 1.025 +/- 0.071

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXpXXXXX
(φψ)-conformation: bbaabppbb
Pattern: x[civwy][FGITV]xx[iktv][DEGKRST]x[DGNPT]xxxx
Conservation:0.9570.3730.400-1.014-1.0250.8391.374-0.8931.734-1.015-0.816-0.141-0.773
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g0u_H_1731g0u   H175187VCVMEIGKDAEYLEEEEESSS--EEEbbbbxaabxxbxx
1g9g_A_3011g9g   A301313AWGGGIDSTWSWIEEEEESSS--EEEbbbbxaabxbbbb
1h6l_A_701h6l   A7183LITTNKKSGLAVYEEEEETTS--EEEbbbbbaabxxbbb
1i4g_A_1811i4g   A184196IVFATSTEPSVNYEEEE-SSS--EEEbbbxbaabwxbbb
1jnr_A_1891jnr   A192204AVGFSVREPKFYVEEEEESSSS-EEEbbbbxaabxbxbb
1m2k_A_1171m2k   A120132RVVRCTSCNNSFEEEEEESSSS-EEEabbbxaaxxbbbb
1nbf_A_3261nbf   A330342SYIQCKEVDYRSDEEEEESSS--EEEbbbbxaabxbbbb
1o75_A_3951o75   A398410VEVRFKEFGSVRAEEEE-SSS--EEEbbxbxaabxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h6l_A_701h6l   A     CACALCIUM ION K - 76
1h6l_A_701h6l   A     PO4PHOSPHATE ION K - 76
1i4g_A_1811i4g   A     ZNZINC ION V - 185
1i4g_A_1811i4g   A     ZNZINC ION A - 187
1m2k_A_1171m2k   A     ZNZINC ION C - 124
1m2k_A_1171m2k   A     ZNZINC ION T - 125
1m2k_A_1171m2k   A     ZNZINC ION S - 126
1m2k_A_1171m2k   A     ZNZINC ION C - 127
1m2k_A_1171m2k   A     ZNZINC ION N - 128
1m2k_A_1171m2k   A     ZNZINC ION N - 129
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h6l_A_701h6l   A AC9PRODUCT PO4 502 BINDING SITE FOR CHAIN AK - 76

Clusters included in this Subclass
CLUSTER: HA.5.54
CLUSTER: HA.6.49
CLUSTER: HA.6.81