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Information on SUBCLASS 6.13.1
Subclass Accession number: 778
Subclass: 6.13.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 14 (>50 %)  
 Number of loops: 7

Average sequence ID (%) : 11.4 +/- 12.9
Average RMSD (Å) : 1.186 +/- 0.511

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhXcpXXhX
(φψ)-conformation: bbppgbppbb
Pattern: xxx[iklv][ekp][DG][dersy][dgnt][agps][imvw]x[fgikt]x
Conservation:-0.038-0.783-0.9490.3320.5432.748-0.615-0.4090.4250.545-0.456-1.115-0.227
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cpt_*_401cpt   -4254MAHIEGYDPMWIAEE--TTS--EEEEbbbbxvbxwbxbx
1dbh_A_5131dbh   A515527EIILKDENSVIFSEE--TTS--EEEEbbbxxUbxxbbbb
1dcp_A_261dcp   A2637.NELEGRDAIFKQ.EE-TTSS-EEEE.bxxxgbxbbbbb
1k2x_B_2941k2x   B298310AWGYAGDTPTTGIEE--TTS--EEEEbbbxpvbxxbbba
1vrt_A_601vrt   A6274AIKKKDSTKWRKLEEE-TTS--EEEEbbbxpvbbbxbbb
2dkb_*_3952dkb   -395407IVQLPGMGGVFRIEE--TTS--EEEEbbbbpvbxxbxxb
3grs_*_2603grs   -266278VTAVPGRLPVMTMEE--TTS--EEEEbbbxxvbxxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbh_A_5131dbh   A     MSESELENOMETHIONINE A - 513
1dbh_A_5131dbh   A     MSESELENOMETHIONINE F - 514
1dbh_A_5131dbh   A     MSESELENOMETHIONINE I - 516
1dbh_A_5131dbh   A     MSESELENOMETHIONINE L - 518
1dbh_A_5131dbh   A     MSESELENOMETHIONINE F - 526
2dkb_*_3952dkb   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID V - 396
2dkb_*_3952dkb   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID L - 398
2dkb_*_3952dkb   *     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID R - 406

Clusters included in this Subclass
CLUSTER: HA.7.37
CLUSTER: HA.8.12