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Information on SUBCLASS 0.1.8
Subclass Accession number: 8070
Subclass: 0.1.8 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 9.6 +/- 15.2
Average RMSD (Å) : 0.606 +/- 0.189

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXXX
(φψ)-conformation: aabb
Pattern: [acgilmpvy][aegkqst][adegknqs][chnrty]xx
Conservation:-0.9451.7690.1720.100-0.959-0.136
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1chm_A_3961chm   A396401PEKNIIHHHHEEaaaaxx
1dmr_*_2621dmr   -265270IANYTSHHHHEEaaaabb
1dym_A_661dym   A6974CAKNCIHHHHEEaaaabb
1eu1_A_2621eu1   A265270LENCTTHHHHEEaaaabb
1f06_A_1891f06   A189194GKQTHKHHHHEEaaaabb
1g8k_A_3251g8k   A328333IEAHTKHHHHEEaaaabb
1gpe_A_4841gpe   A484489MKEYFAHHHHEEaaaaxa
1h5y_A_271h5y   A2732QGIREVHHHHEEaaaaxa
1htr_B_2731htr   B273278PSSYILHHHHEEaaaabb
1iat_A_2381iat   A238243VAKHFVHHHHEEaaaabb
1ih7_A_7881ih7   A788793IAKYDVHHHHEEaaaaxb
1ivy_A_2021ivy   A209214QTHCCSHHHHEEaaaabb
1j7n_A_331j7n   A4045MKHIVKHHHHEEaaaabb
1l9x_A_1841l9x   A186191LKKFFNHHHHEEaaaabx
1q16_B_4521q16   B452457YEDRFVHHHHEEaaaabb
1tmo_*_2681tmo   -271276IQGYSLHHHHEEaaaabb
1ygp_A_4411ygp   A445450AIVGSHHHHHEEaaaaba
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dym_A_661dym   A     5HPPYROGLUTAMIC ACID C - 69
1dym_A_661dym   A     5HPPYROGLUTAMIC ACID A - 70
1dym_A_661dym   A     5HPPYROGLUTAMIC ACID C - 73
1dym_A_661dym   A     5HPPYROGLUTAMIC ACID I - 74
1dym_A_661dym   A     5HPPYROGLUTAMIC ACID M - 75
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE F - 488
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE A - 489
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE G - 490
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE G - 490
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE E - 491
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE E - 491
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE T - 492
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE T - 492
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE L - 493

Clusters included in this Subclass
CLUSTER: HE.0.5