Information on SUBCLASS 5.26.1 |
Subclass Accession number: 8604
Subclass: 5.26.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 18.5 +/- 16.9 Average RMSD (Å) : 0.700 +/- 0.187 Consensus geometry
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Consensus Sequence: | pXGhXhXXp |
(φψ)-conformation: | aagbppabb |
Pattern: | [GNRS] | [AVWY] | x | [ADER] | [ADKQT] | [fhq] | [GN] | [ILV] | [ipt] | [pv] | [ades] | [ckl] | [dst] |
Conservation: | -0.030 | -0.457 | 0.683 | -0.168 | -0.622 | -0.633 | 2.362 | 1.435 | -0.749 | 0.521 | -0.897 | -1.031 | -0.414 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c4k_A_517 | 1c4k | A | 522 | 534 | NYLRDHGIIPEKS | HHHHHTT---SEE | aaaaaagxxxabb |
1gpe_A_310 | 1gpe | A | 311 | 323 | SVLDQANVTQLLD | HHHHHTT---SEE | aaaaaavbxxabx |
1jr2_A_226 | 1jr2 | A | 230 | 242 | RALAAQGLPVSCT | HHHHHTT---SEE | aaaaaavbxxabb |
1krh_A_310 | 1krh | A | 318 | 330 | SWLDTQGIQPANF | HHHHHHT---SEE | aaaaaavxbxabb |
4gsa_A_257 | 4gsa | A | 257 | 269 | GVQEKFGVTPDLT | HHHHHT----SEE | eaaaaavbxxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1krh_A_310 | 1krh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 310 |
1krh_A_310 | 1krh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 333 |
1krh_A_310 | 1krh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | K - 334 |
1krh_A_310 | 1krh | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 335 |
4gsa_A_257 | 4gsa | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 270 |
Clusters included in this Subclass |
CLUSTER: HE.5.162 |
CLUSTER: HE.7.61 |