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Information on SUBCLASS 1.1.16
Subclass Accession number: 8798
Subclass: 1.1.16 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 15.0 +/- 20.6
Average RMSD (Å) : 0.700 +/- 0.141

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXphX
(φψ)-conformation: aapaa
Pattern: [ey]x[ADNS]x[CDRS]xx[LM][AKRT]x
Conservation:-0.025-0.4730.393-0.739-0.4680.671-0.8562.3950.069-0.967
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ei9_A_1921ei9   A195204YRNHSIFLADHHHH-SSHHHaaaaxaaaaa
1i7d_A_5631i7d   A563572EMATRPDMTAHHHHSTHHHHaaaabaaaaa
1pja_A_1851pja   A188197YLNASSFLALHHHH-SSHHHaaaapaaaaa
1q7e_A_3451q7e   A345354EISLDPSLRQHHHH-HHHHHUaaaxaaaaa
2frv_A_1842frv   A184193VHDNCPRLKHHHHH-TTHHHaaaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ei9_A_1921ei9   A     NAGN-ACETYL-D-GLUCOSAMINE D - 193
1ei9_A_1921ei9   A     NAGN-ACETYL-D-GLUCOSAMINE I - 194
1ei9_A_1921ei9   A     NAGN-ACETYL-D-GLUCOSAMINE N - 197
1ei9_A_1921ei9   A     NAGN-ACETYL-D-GLUCOSAMINE H - 198
1pja_A_1851pja   A     NAGN-ACETYL-D-GLUCOSAMINE D - 186
1pja_A_1851pja   A     NAGN-ACETYL-D-GLUCOSAMINE L - 189
1pja_A_1851pja   A     NAGN-ACETYL-D-GLUCOSAMINE N - 190
1pja_A_1851pja   A     GOLGLYCEROL L - 197
1q7e_A_3451q7e   A     MSESELENOMETHIONINE E - 345
1q7e_A_3451q7e   A     MSESELENOMETHIONINE I - 346
1q7e_A_3451q7e   A     MSESELENOMETHIONINE S - 347
1q7e_A_3451q7e   A     MSESELENOMETHIONINE L - 348
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER V - 184
2frv_A_1842frv   A     FS3FE3-S4 CLUSTER V - 184
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER H - 185
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER D - 186
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER C - 188
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER P - 189
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER R - 190
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER L - 191
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER K - 192
2frv_A_1842frv   A     FS4IRON/SULFUR CLUSTER F - 194

Clusters included in this Subclass
CLUSTER: HH.2.111
CLUSTER: HH.3.72