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Information on SUBCLASS 2.1.10
Subclass Accession number: 8892
Subclass: 2.1.10 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 10.3 +/- 13.3
Average RMSD (Å) : 0.608 +/- 0.233

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pphXpX
(φψ)-conformation: aappaa
Pattern: xx[dnqrst]x[acglmv][adgnpst][eknpqrs][adegnqrs]x[kqrw]
Conservation:-2.0260.2140.574-0.515-0.7120.5540.695-0.278-0.1921.686
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ez0_A_291ez0   A4554DFRRLNNSKRHHHHS-HHHHaaaaxxaaaa
1ivh_A_1051ivh   A108117LVRNGNEAQKHHHH--HHHHaaaaxxaaaa
1izo_A_2631izo   A267276WLRSGNSRERHHHT--HHHHaaaabbaaaa
1jk0_A_1181jk0   A122131WNNRMNENERHHHT--HHHHaaaabxaaaa
1jqk_A_4941jqk   A497506TTQYAGEGLKHHHHS-HHHHaaaaxpaaaa
1jqo_A_781jqo   A8695KLTGLAPADAHHHHS-HHHHaaaapxaaaa
1kbi_A_1251kbi   A132141ASQTLTKQAWHHHHS-HHHHaaaaxxaaaa
1ki9_A_581ki9   A5867QMRKLDPDTQHHHHS-HHHHaaaappaaaa
1na7_A_151na7   A1524VNTHRPREYWHHHHS-HHHHaaaaxpaaaa
1tml_*_1181tml   -121130LMSSCMQHVQHHTTS-HHHHaaaabpaaaa
1uby_*_2831uby   -288297CLQRVTPEQRHHHH--HHHHaaaaxbaaaa
1udy_A_921udy   A108117LIIGGNYQQQHHHH--HHHHaaaabxaaaa
2dpm_A_1082dpm   A108117RIDMMSEVQRHHHHS-HHHHaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kbi_A_1251kbi   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 139
1kbi_A_1251kbi   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 143
1kbi_A_1251kbi   A     FMNFLAVIN MONONUCLEOTIDE Y - 143
1kbi_A_1251kbi   A     FMNFLAVIN MONONUCLEOTIDE Y - 144
1kbi_A_1251kbi   A     FMNFLAVIN MONONUCLEOTIDE S - 145
1udy_A_921udy   A     CS83-THIAOCTANOYL-COENZYME A Q - 95
1udy_A_921udy   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 96
1udy_A_921udy   A     CS83-THIAOCTANOYL-COENZYME A T - 96
1udy_A_921udy   A     CS83-THIAOCTANOYL-COENZYME A E - 99
1udy_A_921udy   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 100
1udy_A_921udy   A     CS83-THIAOCTANOYL-COENZYME A A - 100
1udy_A_921udy   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 103
1udy_A_921udy   A     CS83-THIAOCTANOYL-COENZYME A L - 103
2dpm_A_1082dpm   A     HGMERCURY (II) ION I - 121
2dpm_A_1082dpm   A     HGMERCURY (II) ION L - 122
2dpm_A_1082dpm   A     HGMERCURY (II) ION L - 125

Clusters included in this Subclass
CLUSTER: HH.1.78
CLUSTER: HH.1.99
CLUSTER: HH.2.128
CLUSTER: HH.3.47