Information on SUBCLASS 2.2.6 |
Subclass Accession number: 8922
Subclass: 2.2.6 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 11.0 +/- 14.2 Average RMSD (Å) : 0.667 +/- 0.225 Consensus geometry
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Consensus Sequence: | XpppXX |
(φψ)-conformation: | aalpaa |
Pattern: | [CLTVY] | x | [adegq] | [ALM] | [acil] | [dekr] | [adqs] | [cstwy] | x | x | [QSTY] | [hqs] | [DEGS] | [ANTV] | [drtw] | [ay] | [cqy] | [DNSV] | [ailp] | [AIMY] | [altv] | [dks] | x |
Conservation: | -0.021 | -0.759 | -0.759 | 2.721 | -0.528 | 0.187 | -0.615 | -0.805 | -0.515 | -1.186 | 1.163 | 1.165 | 1.652 | 0.585 | -1.404 | 1.054 | 0.183 | -0.304 | -1.033 | 0.138 | -0.349 | -0.090 | -0.482 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cpy_*_204 | 1cpy | - | 217 | 239 | CLGLIESCYDSQSVWSCVPATIY | HHHHHHHHHHH--HHHHHHHHHH | aaaaaaaaaaalxaaaaaaaaaa |
1dl2_A_275 | 1dl2 | A | 278 | 300 | YEYLLKQYLLTHETLYYDLYRKS | HHHHHHHHHHH--HHHHHHHHHH | aaaaaaaaaaavxaaaaaaaaaa |
1fp3_A_122 | 1fp3 | A | 128 | 150 | TMAMNELWRVTAEARYQSEAVDM | HHHHHHHHHHH--HHHHHHHHHH | aaaaaaaaaaavxaaaaaaaaaa |
1g6a_A_119 | 1g6a | A | 119 | 141 | LDDACFATMTTSDNTAANIILSA | HHHHHHHHHHH--HHHHHHHHHH | aaaaaaaaaaavpaaaaaaaaaa |
1i2s_A_119 | 1i2s | A | 119 | 141 | LKELADASLRYSDNTAQNLILKQ | HHHHHHHHHHH--HHHHHHHHHH | aaaaaaaaaaalxaaaaaaaaaa |
1nj4_A_99 | 1nj4 | A | 99 | 121 | VSQLIRDINLQSGNDACVAMADF | HHHHHHHHHHH--HHHHHHHHHH | aaaaaaaaaaalxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dl2_A_275 | 1dl2 | A | CACALCIUM ION | S - 276 |
1dl2_A_275 | 1dl2 | A | CACALCIUM ION | E - 279 |
1i2s_A_119 | 1i2s | A | CITCITRIC ACID | Y - 129 |
1i2s_A_119 | 1i2s | A | CITCITRIC ACID | S - 130 |
1i2s_A_119 | 1i2s | A | CITCITRIC ACID | N - 132 |
Clusters included in this Subclass |
CLUSTER: HH.1.53 |
CLUSTER: HH.3.135 |