Information on SUBCLASS 10.17.1 |
Subclass Accession number: 9233
Subclass: 10.17.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 65.2 +/- -15.5 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | pLGPRhXpccXShV |
(φψ)-conformation: | aappppaalpppaa |
Pattern: | [P] | [S] | [T] | [W] | [NT] | [L] | [G] | [P] | [R] | [CG] | [ADP] | [EKQ] | [GN] | [DK] | [KL] | [S] | [AP] | [V] | [E] | [AEQ] | [AS] | [L] |
Conservation: | 1.306 | -0.005 | 0.432 | 3.053 | -0.496 | -0.005 | 0.869 | 1.306 | 0.432 | -0.631 | -1.315 | -0.636 | -0.416 | -0.772 | -1.209 | -0.005 | -0.611 | -0.005 | 0.432 | -1.073 | -0.647 | -0.005 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1frf_L_498 | 1frf | L | 498 | 519 | PSTWNLGPRGPQGDKSPVEEAL | HHHHHH----TT----HHHHHH | aaaaaaxxxxaavxpxaaaaaa |
1ubk_L_501 | 1ubk | L | 501 | 522 | PSTWTLGPRCDKNKLSPVEASL | HHHHHH----TT----HHHHHH | aaaaaaxxxxaavxxxaaaaaa |
2frv_B_485 | 2frv | B | 485 | 506 | PSTWNLGPRCAEGKLSAVEQAL | HHHHHH----TT----HHHHHH | aaaaaaxxxxaavxxxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1frf_L_498 | 1frf | L | FEFE (III) ION | P - 498 |
1frf_L_498 | 1frf | L | FEFE (III) ION | S - 499 |
1frf_L_498 | 1frf | L | NINICKEL (II) ION | S - 499 |
1frf_L_498 | 1frf | L | MGMAGNESIUM ION | T - 500 |
1ubk_L_501 | 1ubk | L | FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) | P - 501 |
1ubk_L_501 | 1ubk | L | FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) | S - 502 |
1ubk_L_501 | 1ubk | L | MGMAGNESIUM ION | T - 503 |
1ubk_L_501 | 1ubk | L | FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) | T - 503 |
2frv_B_485 | 2frv | B | FCOCARBONMONOXIDE-(DICYANO) IRON | P - 485 |
2frv_B_485 | 2frv | B | OOXYGEN ATOM | P - 485 |
2frv_B_485 | 2frv | B | FCOCARBONMONOXIDE-(DICYANO) IRON | S - 486 |
2frv_B_485 | 2frv | B | OOXYGEN ATOM | S - 486 |
2frv_B_485 | 2frv | B | FCOCARBONMONOXIDE-(DICYANO) IRON | T - 487 |
2frv_B_485 | 2frv | B | OOXYGEN ATOM | T - 487 |
2frv_B_485 | 2frv | B | MO3MAGNESIUM ION, 3 WATERS COORDINATED | T - 487 |
Clusters included in this Subclass |
CLUSTER: HH.9.55 |