PDB: 1k3z Compound: transcription factor p65 Classification: TRANSCRIPTION Entry date in PDB: 2002-10-04 Resolution [Å]: 2.50 R-Factor: 0.181

CHAIN: A SWISS-PROT/TREMBL: Q04207    KEYWORD: 3D-structure    Activator    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Transcription regulation    SCOP: b.1.18.1 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain    p65 subunit of NF-kappa B (NFKB), dimerization domain    Mouse (Mus musculus) GO:  nucleus    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent    CHAIN: B SWISS-PROT/TREMBL: Q04207    KEYWORD: 3D-structure    Activator    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Transcription regulation    SCOP: b.1.18.1 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain    p65 subunit of NF-kappa B (NFKB), dimerization domain    Mouse (Mus musculus) GO:  nucleus    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB95 clusters

1k3z_B_244 - HA => SUBCLASS : 3.7.1

Loops not clustered in ArchDB

1k3z_B_196 - AR
1k3z_B_203 - AR
1k3z_B_211 - AR
1k3z_B_233 - AR
1k3z_B_249 - AR
1k3z_B_284 - EH
1k3z_B_225 - HA
1k3z_B_266 - HA

1bft A - percentage of sequence identity: 100
1bft B - percentage of sequence identity: 100
1gji A - percentage of sequence identity: 72
1gji B - percentage of sequence identity: 72
1ikn A - percentage of sequence identity: 100
1k3z A - percentage of sequence identity: 100
1k3z B - percentage of sequence identity: 100
1le5 A - percentage of sequence identity: 100
1le5 E - percentage of sequence identity: 100
1le9 A - percentage of sequence identity: 100
1le9 E - percentage of sequence identity: 100
1lei A - percentage of sequence identity: 100
1my5 A - percentage of sequence identity: 100
1my5 B - percentage of sequence identity: 100
1my7 A - percentage of sequence identity: 99
1my7 B - percentage of sequence identity: 99
1nfi A - percentage of sequence identity: 99
1nfi C - percentage of sequence identity: 99
1oy3 B - percentage of sequence identity: 100
1oy3 C - percentage of sequence identity: 100
1oy3 D - percentage of sequence identity: 98
1ram A - percentage of sequence identity: 100
1ram B - percentage of sequence identity: 100
1vkx A - percentage of sequence identity: 100
1zk9 A - percentage of sequence identity: 60
1zka A - percentage of sequence identity: 60
2ram A - percentage of sequence identity: 100
2ram B - percentage of sequence identity: 100