Information on SUBCLASS 0.1.20 |
Subclass Accession number: 5207
Subclass: 0.1.20 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 13.9 +/- 16.3 Average RMSD (Å) : 0.589 +/- 0.154 Consensus geometry
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Consensus Sequence: | XXhp |
(φψ)-conformation: | aabb |
Pattern: | x | [degrt] | [aflv] | [ALV] | x | [aeknst] | [EHKNY] | x | [ADEGNQ] | x | x | [HKRST] | x |
Conservation: | -1.315 | -0.807 | -0.425 | 1.639 | -0.789 | -0.028 | 1.792 | -0.053 | 0.004 | -1.137 | 0.562 | 0.556 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cdw_A_266 | 1cdw | A | 267 | 278 | EGLVLTHQQFSS. | HHHHHHTTTTEE. | aaaaaaaaaabb. |
1g8m_A_128 | 1g8m | A | 133 | 145 | LRAAAKNHARVTV | HHHHHHTTTT-EE | aaaaaaaaaaxxb |
1m4l_A_15 | 1m4l | A | 23 | 35 | DLLVAEHPQLVSK | HHHHHH-TTTEEE | aaaaaaaaaabbb |
1nm1_A_55 | 1nm1 | A | 55 | 67 | GDEAQSKRGILTL | HHHHHHTTTTEEE | eaaaaaaaaabbx |
1nw2_A_30 | 1nw2 | A | 40 | 52 | EEFAEAHADKVTV | HHHHHHHTTT-EE | aaaaaaaaaabbb |
1obr_*_12 | 1obr | - | 20 | 32 | NTVASNYPNIVKK | HHHHHH-TTTEEE | aaaaaaaaaabbx |
1ono_A_12 | 1ono | A | 18 | 30 | LDVVRHNPEHFRV | HHHHHH-TTTEEE | aaaaaaaaaabbx |
1pox_A_38 | 1pox | A | 41 | 53 | MDALSAERDRIHY | HHHHHHTTTTSEE | aaaaaaaaaabbx |
1qna_A_130 | 1qna | A | 131 | 142 | EGLAYSHAAFSS. | HHHHHHTTTTEE. | aaaaaaaaaabb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g8m_A_128 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | G - 128 |
1g8m_A_128 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | G - 129 |
1g8m_A_128 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | V - 130 |
1g8m_A_128 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | L - 132 |
1g8m_A_128 | 1g8m | A | MSESELENOMETHIONINE | T - 144 |
1g8m_A_128 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | T - 144 |
1nm1_A_55 | 1nm1 | A | SO2SULFUR DIOXIDE | R - 62 |
1nw2_A_30 | 1nw2 | A | ACTACETATE ION | E - 41 |
1nw2_A_30 | 1nw2 | A | ZNZINC ION | F - 42 |
1nw2_A_30 | 1nw2 | A | ZNZINC ION | A - 45 |
1nw2_A_30 | 1nw2 | A | ACTACETATE ION | A - 45 |
1nw2_A_30 | 1nw2 | A | ZNZINC ION | H - 46 |
1nw2_A_30 | 1nw2 | A | ACTACETATE ION | H - 46 |
1obr_*_12 | 1obr | * | CACALCIUM ION | E - 14 |
Clusters included in this Subclass |
CLUSTER: HE.5.26 |