Information on SUBCLASS 2.4.4 |
Subclass Accession number: 5390
Subclass: 2.4.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 14.1 +/- 18.2 Average RMSD (Å) : 0.580 +/- 0.301 Consensus geometry
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Consensus Sequence: | ppXXhX |
(φψ)-conformation: | aalaba |
Pattern: | [ILMTV] | [degk] | x | [GLW] | x | [adekq] | [aeknqrs] | [dgknqr] | x | [ILV] | x | [dkrstwy] | [acilmvy] | x | x |
Conservation: | 1.598 | -0.346 | -1.009 | 0.664 | -0.394 | 0.346 | 0.039 | -0.339 | -0.555 | 2.689 | -0.713 | -0.815 | -0.015 | -0.804 | -0.345 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1brm_A_135 | 1brm | A | 144 | 158 | LGGLFANDLVDWVSV | HHHHHTTT-EEEEEE | aaaaaaalaxabbbb |
1go4_A_59 | 1go4 | A | 72 | 86 | LKDWLYKCSVQKLVV | HHHHHHTT-EEEEEE | aaaaaaalaxabbbb |
1j4a_A_242 | 1j4a | A | 245 | 259 | VIRGLDSGKIFGYAM | HHHHHHHTSEEEEEE | aaaaaaavaxabbbb |
1jms_A_355 | 1jms | A | 366 | 380 | TDFWKQQGLLLYCDI | HHHHHHTT-EEEEEE | aaaaaaavaxabbbb |
1jn3_A_208 | 1jn3 | A | 215 | 229 | VEQLQKVRFITDTLS | HHHHHHTT-EEEEEE | aaaaaaavaxabbab |
1mb4_A_134 | 1mb4 | A | 143 | 157 | LGGLYERGLVEWMSA | HHHHHHTT-EEEEEE | aaaaaaalaxabbbb |
1mwq_A_21 | 1mwq | A | 28 | 42 | LKQLQAENRLLTAGP | HHHHHHTT-EEEEEE | aaaaaaalababbex |
1nwc_A_136 | 1nwc | A | 145 | 159 | IGGLFEKDLVEWISV | HHHHHHTT-EEEEEE | aaaaaaalaxabbbb |
1ooy_A_60 | 1ooy | A | 60 | 74 | LGLLLQSKQIKRMIS | HHHHHHTT-EEEEEE | aaaaaaalababbbb |
2cev_A_248 | 2cev | A | 255 | 269 | MEMLAEAQIITSAEF | HHHHHHHT-EEEEEE | aaaaaaavaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1brm_A_135 | 1brm | A | AT1ACTIVE SITE IDENTIFIED FROM MODIFIED CYS. | C - 135 |
1brm_A_135 | 1brm | A | AT1ACTIVE SITE IDENTIFIED FROM MODIFIED CYS. | Q - 162 |
Clusters included in this Subclass |
CLUSTER: HE.2.30 |
CLUSTER: HE.3.41 |
CLUSTER: HE.4.254 |