Information on SUBCLASS 4.12.1 |
Subclass Accession number: 5653
Subclass: 4.12.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 23 Average sequence ID (%) : 20.5 +/- 20.5 Average RMSD (Å) : 0.504 +/- 0.218 Consensus geometry
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Consensus Sequence: | hhpGXphh |
(φψ)-conformation: | aapgpabb |
Pattern: | [dehkprst] | [adekqrst] | [acgikltv] | [afikltv] | [dehknqrst] | [DGN] | x | [adeknqrs] | [acfilmvw] | [AFILMV] | [fhilvy] |
Conservation: | -0.788 | -0.568 | -0.626 | -0.184 | -0.228 | 2.566 | -0.395 | -0.054 | -0.674 | 1.157 | -0.205 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1az9_*_113 | 1az9 | - | 118 | 128 | YQLLNGLDVVY | HHHHTT-SEEE | aaaapvxabbx |
1bfd_*_257 | 1bfd | - | 261 | 271 | SQLLEGHDVVL | HHHHTT-SEEE | aaaapgxabbb |
1d5c_A_77 | 1d5c | A | 78 | 88 | PSYIRDSAAAI | HHHHTT-SEEE | aaaapUxabbb |
1duv_G_218 | 1duv | G | 219 | 229 | AKGVEGADFIY | HHHHTT-SEEE | aaaapvxabbb |
1h3f_A_8 | 1h3f | A | 13 | 23 | ALLKRGAEEIV | HHHHTT-SEEE | aaaapvxabbb |
1hdo_A_58 | 1hdo | A | 62 | 72 | DKTVAGQDAVI | HHHHTT-SEEE | aaaapvxabbb |
1j1u_A_3 | 1j1u | A | 5 | 15 | EMIKRNTSEII | HHHHTT-SEEE | aaaapvxabbb |
1j5v_A_120 | 1j5v | A | 121 | 131 | EKILDGARWFH | HHHHTT-SEEE | aaaapvxabbb |
1j6r_A_76 | 1j6r | A | 79 | 89 | TKHLSGSKIIT | HHHHSS-SEEE | aaaaxvbabbx |
1js1_X_223 | 1js1 | X | 224 | 234 | MKAFEGADFIY | HHHHTT-SEEE | aaaapvxabbb |
1k6j_A_64 | 1k6j | A | 68 | 78 | DTLFEGAHLAF | HHHHTT-SEEE | aaaaxvxabbb |
1m66_A_79 | 1m66 | A | 80 | 90 | EKAYNGAEIIL | HHHHTT-SSEE | aaaapvpabbb |
1mb4_A_318 | 1mb4 | A | 318 | 328 | PAKVTGTLSVP | HHHHTTSS-EE | aaaapvbaxbx |
1mld_A_62 | 1mld | A | 63 | 73 | PDCLKGCDVVV | HHHHTT-SEEE | aaaaxvxabbb |
1n3l_A_7 | 1n3l | A | 12 | 22 | HLITRNLQEVL | HHHHTT-SEEE | aaaaxvxabbb |
1n8y_C_17 | 1n8y | C | 25 | 35 | RHLYQGCQVVQ | HHHHTT-SEEE | aaaaxvxabxx |
1nlf_A_121 | 1nlf | A | 128 | 138 | KRAAEGRRLMV | HHHHTT-SEEE | aaaaxvbabbb |
1obb_A_71 | 1obb | A | 72 | 82 | DDVIIDADFVI | HHHHTT-SEEE | aaaapvxabbb |
1ofu_A_86 | 1ofu | A | 90 | 100 | SEVLEGADMVF | HHHHTT-SEEE | aaaapvxabbb |
1oth_A_250 | 1oth | A | 251 | 261 | LEAAHGGNVLI | HHHHTT-SEEE | aaaapvxabxb |
1pze_A_85 | 1pze | A | 86 | 96 | EAALTGADCVI | HHHHTT-SEEE | aaaapvxabbb |
1vjt_A_70 | 1vjt | A | 71 | 81 | DEAIDGADFII | HHHHTT-SEEE | aaaapvxabbx |
2cmd_*_64 | 2cmd | - | 64 | 74 | TPALEGADVVL | HHHHTT-SEEE | aaaapvxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ofu_A_86 | 1ofu | A | AC1GDP BINDING SITE FOR CHAIN A | G - 104 |
Clusters included in this Subclass |
CLUSTER: HE.4.30 |