Information on SUBCLASS 5.3.2 |
Subclass Accession number: 1376
Subclass: 5.3.2 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 54861 (>75 %) |
Number of loops: 12 Average sequence ID (%) : 9.7 +/- 13.9 Average RMSD (Å) : 0.742 +/- 0.264 Consensus geometry
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Consensus Sequence: | XXppXhXXX |
(φψ)-conformation: | bbabpppaa |
Pattern: | x | x | [filmptv] | x | [denpqrst] | [ehknqsty] | [aglptv] | [AFILPY] | [ACDPST] | [adegps] | x | x | [efkqr] | x | x | [AGLMVWY] |
Conservation: | -0.264 | -0.019 | -0.062 | -1.820 | 0.787 | 0.059 | -0.477 | 1.529 | 2.362 | 0.729 | -0.441 | -0.945 | -0.413 | -0.562 | -0.794 | 0.331 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aln_*_119 | 1aln | - | 121 | 136 | AITVNYTPCGHCRQFM | EEEESS---HHHHHHH | bbbbabppxaaaaaaa |
1dxy_*_47 | 1dxy | - | 49 | 64 | NSLQTTPYAAGVFEKM | EE--SS-B-HHHHHHH | bbbbaxxbxaaaaaaa |
1fm0_E_4 | 1fm0 | E | 6 | 21 | IVVGPQPFSVGEEYPW | EEEESS---HHHHHHH | bbbbapxbbaaaaaaa |
1gdh_A_172 | 1gdh | A | 174 | 189 | DYFDTHRASSSDEASY | EEE-SS---HHHHHHH | bbbbabxxpaaaaaaa |
1gml_A_289 | 1gml | A | 289 | 304 | VVITEKGISDLAQHYL | EEEESS-B-HHHHHHH | bbbbabxbxaaaaaaa |
1j8u_A_241 | 1j8u | A | 242 | 257 | LRPVAGLLSSRDFLGG | EEE--S---HHHHHHH | bbwbabxxxaaaaaaa |
1q3q_A_290 | 1q3q | A | 290 | 305 | VVFVQKGIDDLAQHYL | EEEESS-B-HHHHHHH | bbbbabxbpaaaaaaa |
1s4n_A_156 | 1s4n | A | 157 | 172 | VFLNDEPFTEEFKEAV | EEEESS---HHHHHHH | bbbbabxxxaaaaaaa |
1sac_A_152 | 1sac | A | 157 | 172 | LYMWDSVLPPENILSA | EEEESS---HHHHHHH | xbbbabxxxaaaaaaa |
1uwv_A_205 | 1uwv | A | 205 | 219 | .LRHTAPLSSADREKL | .EEESS---HHHHHHH | .bxbabpxxaaaaaaa |
2nac_A_216 | 2nac | A | 218 | 233 | HYTDRHRLPESVEKEL | EEE-SS---HHHHHHH | bbbbabxxwaaaaaaa |
2sli_*_250 | 2sli | - | 255 | 270 | IKVYSNALSDEELIQA | EEEESS---HHHHHHH | bbbbaxxxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1aln_*_119 | 1aln | * | ZNZN BINDING SITE. | C - 129 |
1aln_*_119 | 1aln | * | ZNZN BINDING SITE. | C - 132 |
1uwv_A_205 | 1uwv | A | AC5PO4 BINDING SITE FOR CHAIN A | R - 206 |
Clusters included in this Subclass |
CLUSTER: EH.5.28 |
CLUSTER: EH.6.10 |