Information on SUBCLASS 1.4.1 |
Subclass Accession number: 2141
Subclass: 1.4.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 45 Average sequence ID (%) : 18.2 +/- 17.2 Average RMSD (Å) : 0.416 +/- 0.189 Consensus geometry
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Consensus Sequence: | XXGXp |
(φψ)-conformation: | aaeaa |
Pattern: | x | x | x | x | [GR] | x | [adegknqrst] | x | [afgltv] |
Conservation: | -0.458 | -0.339 | -0.437 | -0.365 | 2.639 | -0.412 | -0.060 | -0.449 | -0.118 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8h_*_308 | 1a8h | - | 312 | 320 | LEKYGRDAL | HHHH-HHHH | aaaaeaaaa |
1aop_*_307 | 1aop | - | 311 | 319 | LERVGVETF | HHHH-HHHH | aaaaMaaaa |
1b3u_A_266 | 1b3u | A | 270 | 278 | QKAVGPEIT | HHHH-HHHH | aaaaeaaaa |
1b63_A_209 | 1b63 | A | 213 | 221 | GAICGTAFL | HHHH-HHHH | aaaaeaaaa |
1cb6_A_1659 | 1cb6 | A | 1660 | 1668 | EKYLGPQYV | HHHH-HHHH | eNaaeaaaa |
1d3g_A_357 | 1d3g | A | 359 | 367 | LTFWGPPVV | HHHH-THHH | aaaaeaaaa |
1d3v_A_200 | 1d3v | A | 203 | 211 | VDKLGIGKV | HHHH-HHHH | aaaaeaaaa |
1e58_A_99 | 1e58 | A | 103 | 111 | AEKYGDEQV | HHHH-HHHH | aaaaeaaaa |
1f14_A_246 | 1f14 | A | 250 | 258 | LDYVGLDTT | HHHH-HHHH | aaaaMaaaa |
1fs7_A_137 | 1fs7 | A | 142 | 150 | IEQDGELEY | HHHH-HHHH | aaaaeaaaa |
1geq_A_89 | 1geq | A | 92 | 100 | IYRAGVRNF | HHHH-HHHH | aaaaMaaaa |
1gk8_A_269 | 1gk8 | A | 269 | 277 | YLTGGFTAN | HHHH-HHHH | aaaaeaaaa |
1h16_A_182 | 1h16 | A | 184 | 192 | VALYGIDYL | HHHH-HHHH | aaaaeaaaa |
1h7s_A_223 | 1h7s | A | 228 | 236 | GSVFGQKQL | HHHH-HHHH | aaaaeaaaa |
1hl2_A_229 | 1hl2 | A | 246 | 254 | LIKTGVFRG | HHHH-HHHH | aaaaeaaaa |
1hnu_A_161 | 1hnu | A | 166 | 174 | PLKFGTNTT | HHHH-HHHH | aaaaeaaaa |
1hzd_A_220 | 1hzd | A | 225 | 233 | PRAIGMSLA | HHHH-HHHH | aaaaeaaaa |
1iat_A_281 | 1iat | A | 284 | 292 | ALHVGFDNF | HHHH-HHHH | aaaaeaaaa |
1jil_A_294 | 1jil | A | 305 | 313 | KFIHGEDAL | HHHH-HHHH | aaaaeaaaa |
1l4u_A_45 | 1l4u | A | 49 | 57 | FATDGEQEF | HHHT-HHHH | aaaaeaaaa |
1m2r_A_238 | 1m2r | A | 246 | 254 | AKVLGTDGL | HHHH-HHHH | aaaaeaaaa |
1m5w_A_216 | 1m5w | A | 222 | 230 | AVMTGLKDA | HHHH-HHHH | aaaaeaaaa |
1n5u_A_6 | 1n5u | A | 11 | 19 | FKDLGEENF | HHHH-HHHH | aaaaeaaaa |
1nd4_A_218 | 1nd4 | A | 229 | 237 | AEELGGEWA | HHHH-HHHH | aaaaeaaaa |
1nh1_A_184 | 1nh1 | A | 195 | 203 | RTELGAKAL | HHHH-HHHH | aaaaMaaaa |
1nnf_A_140 | 1nnf | A | 150 | 158 | SKMKGDKVA | HHHH-HHHH | aaaaeaaaa |
1o82_A_51 | 1o82 | A | 59 | 67 | IKKKGKRAV | HHHH-HHHH | aaaaeaaaa |
1o8u_A_156 | 1o8u | A | 161 | 169 | PHVLGSNRG | HHHH-HHHH | aaaaeaaaa |
1pmi_*_166 | 1pmi | - | 169 | 177 | NEIIGQELV | HHHH-HHHH | aaaaeaaaa |
1q4g_A_413 | 1q4g | A | 414 | 422 | LVDYGVEAL | HHHH-HHHH | aaaaeaaaa |
1q6o_A_36 | 1q6o | A | 39 | 47 | CVGEGVRAV | HHHH-THHH | aaaaeaaaa |
1q8h_A_27 | 1q8h | A | 33 | 41 | ADHIGFQEA | HHHH-HHHH | aaaaeaaaa |
1qe3_A_324 | 1qe3 | A | 332 | 340 | EYLLGKPLA | HHHH-HHHH | aaaaeaaaa |
1qmg_A_359 | 1qmg | A | 364 | 372 | ISTKGMLAL | HHHT-HHHH | aaaaeaaaa |
1qsa_A_545 | 1qsa | A | 551 | 559 | AYNAGPGRV | HHHH-HHHH | aaaaeaaaa |
1ro2_A_115 | 1ro2 | A | 119 | 127 | KAWIGESAL | HHHH-HHHH | aaaaeaaaa |
1rqj_A_271 | 1rqj | A | 272 | 280 | PALLGLEQA | HHHH-HHHH | aaaaeaaaa |
1ryo_A_311 | 1ryo | A | 312 | 320 | KMYLGYEYV | HHHH-HHHH | aaaaeaaaa |
1s68_A_172 | 1s68 | A | 179 | 187 | VDHAGLVDA | HHHH-HHHH | aaaaeaaaa |
1ujp_A_100 | 1ujp | A | 103 | 111 | VLAWGPERF | HHHH-HHHH | aaaaeaaaa |
1vhn_A_240 | 1vhn | A | 255 | 263 | IKTKGERKA | HHHH-HHHH | aaaaeaaaa |
1via_A_47 | 1via | A | 51 | 59 | FEQKRENFF | HHHH-HHHH | aaaaeaaaa |
1vj7_A_87 | 1vj7 | A | 91 | 99 | EFDFGKDVR | HHHH-HHHH | aaaaeaaaa |
1xyz_A_658 | 1xyz | A | 660 | 668 | RNVIGQDYL | HHHH-TTHH | aaaaeaaaa |
3thi_A_194 | 3thi | A | 204 | 212 | INMAGEKPS | HHHH-HHHH | aaaaeaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_182 | 1h16 | A | PG1PG4 BINDING SITE FOR CHAIN A | A - 198 |
1h16_A_182 | 1h16 | A | PG1PG4 BINDING SITE FOR CHAIN A | Q - 199 |
1o82_A_51 | 1o82 | A | AC3SO4 BINDING SITE FOR CHAIN D | R - 65 |
Clusters included in this Subclass |
CLUSTER: HH.0.11 |
CLUSTER: HH.0.15 |
CLUSTER: HH.1.11 |
CLUSTER: HH.2.13 |